| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_0389 |
|---|
| Symbol | |
|---|
| ID | 7116396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 379838 |
|---|
| End bp | 380935 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643523188 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002419253 |
|---|
| Protein GI | 218528437 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0428619 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.991349 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCCT ACATCTTGCG CCGCATCGCG CTGATGATCC CGACGATCTT CGGGATCATG
CTCATCACCT TCGCCATCAT CCAGTTCGCC CCGGGCGGCC CGGTGGAGCG GGTTCTGGCC
CAGCTCCAGG GCCAGCAGGA AGGCTCGCTC TCGCGCATCA CCGGCGGCCA GGGCGATCTC
GGCGGCGGGG CGGCCCGCGG CGGCGGTGAG GCTTCGAAGT ACCGCGGCGC GCAGGGGCTC
GACCCCGCCT TCATCAAGAA GCTCGAGGCC CAGTTCGGCT TCGACAAGCC CGCCTATGAG
CGCTTCGGCA AGATGCTGTG GGATTACCTG CGCTTCGATT TCGGCCGCAG CTATTTTCGC
GATGTCTCGG TGCTGGACCT GATCAAGGAG AAGCTCCCGG TCTCGATCTC GCTCGGCCTA
TGGATGACGC TGATCTCCTA CGCGATTTCG ATCCCCCTCG GCATCCGCAA GGCGGTCGCC
GACGGTTCGC GCTTCGACGT CTGGACCTCG GCGGTCGTCA TCGTCGGCTA CGCGATCCCG
AGTTTCCTGT TCGGCATCCT GCTGGTGATC CTGTTCGCGG GCGGCTCGTT CCTCCAGATC
TTCCCGCTGC GCGGTCTCAC TTCCGAGAAT TTCGAGTCCC TAAGCCTCTG GGGCAAAGCC
CTGGACTATG CGTGGCACCT CGTGCTGCCG CTCTCCGCCC TGGTGCTCGG CGCCTTCGCC
ACCTCGACCC TGCTGACCAA GAACTCGTTC CTCGACGAGA TCCGCAAGCA ATACGTCGTC
ACCGCCCGCA TGAAGGGCGT GAGCGAGCGG CGCGTCCTCT ACGGCCACGT CTTCCGCAAC
GCGATGCTCA TCGTGATTGC CGGCTTTCCC GGCGCCTTCA TCACCGCCTT TTTCACCGGT
TCGCTGCTGA TCGAGACGAT CTTCTCGCTC GACGGGCTCG GGCTCCTGTC GTTCAGCTCC
ATCGTCGGCC GCGACTATCC GGTGGTATTC GCCACGCTCT ACATCTTCTC CCTGCTCGGT
CTGGCCGTGA ATCTACTCTC CGACCTCACC TACACCTGGA TTGATCCGCG CATCGATTTC
TCCGCGCGCG GCGCCTGA
|
|---|
| Protein sequence | MLAYILRRIA LMIPTIFGIM LITFAIIQFA PGGPVERVLA QLQGQQEGSL SRITGGQGDL
GGGAARGGGE ASKYRGAQGL DPAFIKKLEA QFGFDKPAYE RFGKMLWDYL RFDFGRSYFR
DVSVLDLIKE KLPVSISLGL WMTLISYAIS IPLGIRKAVA DGSRFDVWTS AVVIVGYAIP
SFLFGILLVI LFAGGSFLQI FPLRGLTSEN FESLSLWGKA LDYAWHLVLP LSALVLGAFA
TSTLLTKNSF LDEIRKQYVV TARMKGVSER RVLYGHVFRN AMLIVIAGFP GAFITAFFTG
SLLIETIFSL DGLGLLSFSS IVGRDYPVVF ATLYIFSLLG LAVNLLSDLT YTWIDPRIDF
SARGA
|
|---|
| |