Gene Mchl_0387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_0387 
Symbol 
ID7116394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp376044 
End bp377957 
Gene Length1914 bp 
Protein Length637 aa 
Translation table11 
GC content67% 
IMG OID643523186 
Productextracellular solute-binding protein family 5 
Protein accessionYP_002419251 
Protein GI218528435 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4166] ABC-type oligopeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.111911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.651599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGAAA ACGCCGTAAT TGCCCGCCGC AGCTTCCTTG CCGGAGCACT CGTCCTCCTG 
GGACTGCGAG GCCCCGTCTC CGCTCAGGAG CCCGCCGAAT CCGCCTCGAA GGTCTCGGCG
CAGGAGGCAC CCGGCAATTG GCGCCATGCG CTGACCCTGC TCGGCGAGCC GAAATACGGC
CCGGACTTCC AGCATTTCGA CTATGCCGAC CCGAAGGCGC CGGTCGGCGG CCTGGTGCGG
CTCGGGTCGC AGGGCGGCTT CGACAACCTC AACTTTATCG TCAACGGCCT GAAGGGCGAT
CTCGAAGGCG GGATCACCCA GATCTACGAC ACGCTGATGG AGGATTCCGG CGACGAGCCG
TTCTCCTCCT ACGGCCTCCT CGCCGAGGCC GTGCGGATCG CCGAGGACGG CCAGTCGGTG
ACCTATCGCC TGCGGCCGAA CGCGCGCTGG CACGACGGCA AGCCGGTCAC CGTCGAGGAC
GTGATCTGGT CCTTCGATAC GCTGAAGGCC AACAGCCCGT TCTATGCTGC CTACTACCAC
ACCGTGGCCA AAGCCGAGCC GGGGGCCGAG CACGAGGTCG TCTTCCGCTT TAGCGAGGCC
GGCAACCGCG AACTGCCCCA GGTGCTGGGC CAGATGCAGG TGCTGCCCAA GCACTGGTGG
ACCGGCACCG ACAAGAACGG CAAGCCGCGC AGCGCCACCG AGACGACGCT CGAGATCCCG
CTCGGCTCCG GCCCCTATCG GCTCACCAAG GTCGATGCCG GCCGCTCGGC CGTCTACGAG
CGCGTGGCCG ATTACTGGGG CAAGGATCTG CCGGTGAATC GCGGCCGCAA CAACTTCGGC
ACGGTCCGCT TCGAGTATTT CCGCGATGGG TCGGTTCTGC TGGAGGCGCT GAAGGGCGAC
CTGTACGACT TCCGCACCGA GAACATCGCT CGCAACTGGG CGACCGCCTA CGACGACTTC
CCGGCGGTGA AGGAAGGGCG CCTCATCAAG GAGGAATTCC CCGGCCGCGG CACCGGCATC
ATGCAGGCCT TCGTGTTCAA CCTGCGCCGG GACAAGTTCA AGGACGAGCG CGTGCGCCGC
GCCTTCAACC TCGCTCTGAA CTTCGAGGAG ATGAACCGGC AGCTCTTCTA CGGCCTCTAC
AGCCGGATCG ATTCCTACTT CTACGGCTCG GACCTCGCCT CGTCGGGCCT GCCCGACGGG
ATGGAGAAGG TGATCCTGGA GAGCGTCAAG GACAAGCTGC CGGGCAGCGT CTTCACCGAG
ACCTACACCA ACCCCGTTAA CGACACGCCC GAAGCCGCGC GGGCCAACCT GCGCAAGGCG
GTTGGCCTGC TGCGGGAGGC CGGCTACGAG CTGAAGGGCG GCAAGATGGT CGCCAAGGCA
ACCGGCGAGC CGCTGACCGT CGAGTTCCTC GAATTCCAGA ACGTGTTCGA GCGGGTGATC
CTGCCCTACG CCGCGCAGCT CAAGCTCATC GGCATCGAGT CCTCGATCCG GGTGATCGAC
CAGGCGCAGT ACCAGAACCG CCTGCGCAGC TTCGACTTCG ACATCACCAC CTCGAACTGG
CCGGAATCGC TCTCGCCCGG CAACGAGCAG CGCGAGTTCT GGGGCTCGGC CGCCGCCGAC
AAGCCGGGCT CGCGCAACAT CGCCGGGATC AAGGATGCGG GCATCGATGC GCTGATCGAG
AAGGTGATCT TTGCGCAGGA CCGCGAGACG CTGGTCGCCG CCACGCACGC CCTCGACCGG
GCGCTCCTCG CCCACAACTT CGTGGTGCCG CAATGGTCTT CGGCCGCGAC GCGGACGCTG
CGCTGGAACC GCTTCGGCCG CCCGGCGGTG CTGCCGAAAT ACGGCTCGTC CGGCTTCCCG
ACGACGTGGT GGTACGACGA GGCGCTCGCC GCCAAGACGG GGGCGCCGCG ATGA
 
Protein sequence
MTENAVIARR SFLAGALVLL GLRGPVSAQE PAESASKVSA QEAPGNWRHA LTLLGEPKYG 
PDFQHFDYAD PKAPVGGLVR LGSQGGFDNL NFIVNGLKGD LEGGITQIYD TLMEDSGDEP
FSSYGLLAEA VRIAEDGQSV TYRLRPNARW HDGKPVTVED VIWSFDTLKA NSPFYAAYYH
TVAKAEPGAE HEVVFRFSEA GNRELPQVLG QMQVLPKHWW TGTDKNGKPR SATETTLEIP
LGSGPYRLTK VDAGRSAVYE RVADYWGKDL PVNRGRNNFG TVRFEYFRDG SVLLEALKGD
LYDFRTENIA RNWATAYDDF PAVKEGRLIK EEFPGRGTGI MQAFVFNLRR DKFKDERVRR
AFNLALNFEE MNRQLFYGLY SRIDSYFYGS DLASSGLPDG MEKVILESVK DKLPGSVFTE
TYTNPVNDTP EAARANLRKA VGLLREAGYE LKGGKMVAKA TGEPLTVEFL EFQNVFERVI
LPYAAQLKLI GIESSIRVID QAQYQNRLRS FDFDITTSNW PESLSPGNEQ REFWGSAAAD
KPGSRNIAGI KDAGIDALIE KVIFAQDRET LVAATHALDR ALLAHNFVVP QWSSAATRTL
RWNRFGRPAV LPKYGSSGFP TTWWYDEALA AKTGAPR