Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_0387 |
Symbol | |
ID | 7116394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | + |
Start bp | 376044 |
End bp | 377957 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643523186 |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_002419251 |
Protein GI | 218528435 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.111911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.651599 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGAAA ACGCCGTAAT TGCCCGCCGC AGCTTCCTTG CCGGAGCACT CGTCCTCCTG GGACTGCGAG GCCCCGTCTC CGCTCAGGAG CCCGCCGAAT CCGCCTCGAA GGTCTCGGCG CAGGAGGCAC CCGGCAATTG GCGCCATGCG CTGACCCTGC TCGGCGAGCC GAAATACGGC CCGGACTTCC AGCATTTCGA CTATGCCGAC CCGAAGGCGC CGGTCGGCGG CCTGGTGCGG CTCGGGTCGC AGGGCGGCTT CGACAACCTC AACTTTATCG TCAACGGCCT GAAGGGCGAT CTCGAAGGCG GGATCACCCA GATCTACGAC ACGCTGATGG AGGATTCCGG CGACGAGCCG TTCTCCTCCT ACGGCCTCCT CGCCGAGGCC GTGCGGATCG CCGAGGACGG CCAGTCGGTG ACCTATCGCC TGCGGCCGAA CGCGCGCTGG CACGACGGCA AGCCGGTCAC CGTCGAGGAC GTGATCTGGT CCTTCGATAC GCTGAAGGCC AACAGCCCGT TCTATGCTGC CTACTACCAC ACCGTGGCCA AAGCCGAGCC GGGGGCCGAG CACGAGGTCG TCTTCCGCTT TAGCGAGGCC GGCAACCGCG AACTGCCCCA GGTGCTGGGC CAGATGCAGG TGCTGCCCAA GCACTGGTGG ACCGGCACCG ACAAGAACGG CAAGCCGCGC AGCGCCACCG AGACGACGCT CGAGATCCCG CTCGGCTCCG GCCCCTATCG GCTCACCAAG GTCGATGCCG GCCGCTCGGC CGTCTACGAG CGCGTGGCCG ATTACTGGGG CAAGGATCTG CCGGTGAATC GCGGCCGCAA CAACTTCGGC ACGGTCCGCT TCGAGTATTT CCGCGATGGG TCGGTTCTGC TGGAGGCGCT GAAGGGCGAC CTGTACGACT TCCGCACCGA GAACATCGCT CGCAACTGGG CGACCGCCTA CGACGACTTC CCGGCGGTGA AGGAAGGGCG CCTCATCAAG GAGGAATTCC CCGGCCGCGG CACCGGCATC ATGCAGGCCT TCGTGTTCAA CCTGCGCCGG GACAAGTTCA AGGACGAGCG CGTGCGCCGC GCCTTCAACC TCGCTCTGAA CTTCGAGGAG ATGAACCGGC AGCTCTTCTA CGGCCTCTAC AGCCGGATCG ATTCCTACTT CTACGGCTCG GACCTCGCCT CGTCGGGCCT GCCCGACGGG ATGGAGAAGG TGATCCTGGA GAGCGTCAAG GACAAGCTGC CGGGCAGCGT CTTCACCGAG ACCTACACCA ACCCCGTTAA CGACACGCCC GAAGCCGCGC GGGCCAACCT GCGCAAGGCG GTTGGCCTGC TGCGGGAGGC CGGCTACGAG CTGAAGGGCG GCAAGATGGT CGCCAAGGCA ACCGGCGAGC CGCTGACCGT CGAGTTCCTC GAATTCCAGA ACGTGTTCGA GCGGGTGATC CTGCCCTACG CCGCGCAGCT CAAGCTCATC GGCATCGAGT CCTCGATCCG GGTGATCGAC CAGGCGCAGT ACCAGAACCG CCTGCGCAGC TTCGACTTCG ACATCACCAC CTCGAACTGG CCGGAATCGC TCTCGCCCGG CAACGAGCAG CGCGAGTTCT GGGGCTCGGC CGCCGCCGAC AAGCCGGGCT CGCGCAACAT CGCCGGGATC AAGGATGCGG GCATCGATGC GCTGATCGAG AAGGTGATCT TTGCGCAGGA CCGCGAGACG CTGGTCGCCG CCACGCACGC CCTCGACCGG GCGCTCCTCG CCCACAACTT CGTGGTGCCG CAATGGTCTT CGGCCGCGAC GCGGACGCTG CGCTGGAACC GCTTCGGCCG CCCGGCGGTG CTGCCGAAAT ACGGCTCGTC CGGCTTCCCG ACGACGTGGT GGTACGACGA GGCGCTCGCC GCCAAGACGG GGGCGCCGCG ATGA
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Protein sequence | MTENAVIARR SFLAGALVLL GLRGPVSAQE PAESASKVSA QEAPGNWRHA LTLLGEPKYG PDFQHFDYAD PKAPVGGLVR LGSQGGFDNL NFIVNGLKGD LEGGITQIYD TLMEDSGDEP FSSYGLLAEA VRIAEDGQSV TYRLRPNARW HDGKPVTVED VIWSFDTLKA NSPFYAAYYH TVAKAEPGAE HEVVFRFSEA GNRELPQVLG QMQVLPKHWW TGTDKNGKPR SATETTLEIP LGSGPYRLTK VDAGRSAVYE RVADYWGKDL PVNRGRNNFG TVRFEYFRDG SVLLEALKGD LYDFRTENIA RNWATAYDDF PAVKEGRLIK EEFPGRGTGI MQAFVFNLRR DKFKDERVRR AFNLALNFEE MNRQLFYGLY SRIDSYFYGS DLASSGLPDG MEKVILESVK DKLPGSVFTE TYTNPVNDTP EAARANLRKA VGLLREAGYE LKGGKMVAKA TGEPLTVEFL EFQNVFERVI LPYAAQLKLI GIESSIRVID QAQYQNRLRS FDFDITTSNW PESLSPGNEQ REFWGSAAAD KPGSRNIAGI KDAGIDALIE KVIFAQDRET LVAATHALDR ALLAHNFVVP QWSSAATRTL RWNRFGRPAV LPKYGSSGFP TTWWYDEALA AKTGAPR
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