Gene Mchl_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_0196 
Symbol 
ID7117679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp195279 
End bp196370 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content71% 
IMG OID643523002 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002419069 
Protein GI218528253 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.973232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGGC CGACCACGAC CGCCACGCGC CCGGTCCTCG TCACCGGTGG CGCGGGCTTC 
GTCGGCGCCA ACCTCGCCGA CCAGCTCGCC GCCGAGGGGC AGACCGTCCT CGTCTACGAT
GCTCTGACGC GTCCCGGCGT CGAGGCGAAC CTGGCTTGGC TCACCGAGCG CCACGGCGCG
CGGATCGTGC CGGTGATCGC CGACATCCGC GACGGCGCTG AACTCGCCCT CGCGGTGCGG
GAGGCCGGCG CGGTGTTCCA CTTCGCTGCC CAAGTCGCTG TGACGACGAG CATGACTGCG
CCTCGGGAGG ACATGGAGGT CAATCTCGGC GGTACGTTGA CCCTGCTGGA GGCCCTGCGC
GCCCGCCGGG GTGCGGTCCC ATTGCTCTTC GCCTCGACCA ACAAGGTCTA TGGCGGCTTG
CCCGACGTGG AGCTGGCGGT CGAGGGTGAC GCCTACCGGC CGACCGATCC AAACTTGCGC
GCCCATGGTG TCGGCGAGGA TCGCCCGCTC GATTTTCACA CCCCCTACGG CTGCTCGAAG
GGCGCGGCGG ATGCCTACGT GCTCGACTAC GCCCGCAGCT ACGGCTTGCC GACCGTCGTG
ATGCGCATGA GCTGCATCTA CGGACCCCGC CAAATGGGCA ACGAGGACCA GGGCTGGGTC
GCCCATTTCC TGATCCGGGC CCTGACGAAC CGAACCGTAA CCCTCTACGG CGACGGGCGG
CAGGTACGCG ACATCCTTCA TGTCCGCGAC GCGGTCGCGG CCTACCGAGC GGCGCTGGCG
CGGATCGACC GGGTGGCCGG GCGAGCGTTC AACCTCGGCG GCGGCCCAGA CAACGCGGTG
AGCCTGCGCG GGCTGATCGC TTATCTCGGC ACGCTGCTCG GGCGCGAGGT CGGGATCGAG
ACCGGCGCAT GGCGGCCCGG CGACCAGCGC TACTACGTCT CCGACACGCG CCGCGCCGCA
TCGATGCTCG GGCTCGAACC CCCACTACCC TGGCGCGAGG GCGTGGCCGA CCTCGCCGCG
TGGCTCACGC AATGGCTCGC CGCGGAGGCC GCGACGAGCC GGGCCGCCCG TCAACCGGAG
GCGGTGCTAT GA
 
Protein sequence
MSGPTTTATR PVLVTGGAGF VGANLADQLA AEGQTVLVYD ALTRPGVEAN LAWLTERHGA 
RIVPVIADIR DGAELALAVR EAGAVFHFAA QVAVTTSMTA PREDMEVNLG GTLTLLEALR
ARRGAVPLLF ASTNKVYGGL PDVELAVEGD AYRPTDPNLR AHGVGEDRPL DFHTPYGCSK
GAADAYVLDY ARSYGLPTVV MRMSCIYGPR QMGNEDQGWV AHFLIRALTN RTVTLYGDGR
QVRDILHVRD AVAAYRAALA RIDRVAGRAF NLGGGPDNAV SLRGLIAYLG TLLGREVGIE
TGAWRPGDQR YYVSDTRRAA SMLGLEPPLP WREGVADLAA WLTQWLAAEA ATSRAARQPE
AVL