| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_0160 |
|---|
| Symbol | |
|---|
| ID | 7117643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 159291 |
|---|
| End bp | 162101 |
|---|
| Gene Length | 2811 bp |
|---|
| Protein Length | 936 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643522968 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
|---|
| Protein accession | YP_002419035 |
|---|
| Protein GI | 218528219 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.195088 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0201971 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACCGC TGACCCCGCC CTCCCGGCGC GAGGCGCTGC GGCTGCTCGG AGCGGGCATC
ACGCTCGCCG CGGGGGGCTG TTCGAAGCCG GTCGAAGAGA TCGTACCCTA TGTCCGCGCG
CCCGAGCAGC TTCTGCCCGG CGTACCGGTG CGCTACGCCA CGACTCTGTC CCTGAGCGGC
TGGGCCCGCG GGGTCCACGC CATCGCCGTC GACGGACGGC CGATCAAGAT CGAGGGCAAT
CCGCTCCATC CCGGCAGCCT GGGGGCGACC GACGTGTTCG CCGAGGCCGC GATCCTCGAC
CTCTACGATC CCGACCGCTC GCGCACGGTG ACCGAGCGCG TCAACGGCAT CGCCTCCTGG
GACATGTTCG AGCGCGCCCT GAGTGGGCCG CTTTCCACCG TGCGCGGCGA GCGCGGACGC
GGCCTGCACC TCGTGACCGG CCGCGTCACC TCGCCGACGC TCGCCCGCCA GATCGATGCC
CTGCTGCAGG CCCTGCCGGA GGCGGTCTGG CATGTTCACG AGGCGATCGA CGAGGCAAAT
GCTGAGCGGG GAGCCGAACT CGCCTTCGGC CGCCCCTTGC GGGCCCTGCC GCGACTCGAC
CGGGCCGAGA CGATCCTGTG CGTCGGCGCC GACCCGCTCG GGGCCGGGCC GGACCAGATC
CGCCTCGCGC GCGCCTTCGC CGAGCGCCGC CGCGATCCGG CCCGGTTCGG GCGCCTCTAC
GTGGCCGAGT CGGCGCTGAC GCTCACGGGC GTCAAGGCGG ATGCGCGGCG CGCAGTGACG
CCGCTTGAGC AGGCGGCGAT CCTGACGAGC GTCGCCAACG CGCTCGGTGC AGGCTTGGCC
GCGCCCGATC TGCCCGAGGC GGCCAGCCGC TTCGCACAGG CGGCCGCCGC CGATTTGACG
GCGCATCAGG GTCGCGCTCT GGTGCTCGCC GGCCCCGCCC TCCCGCCGGA ATGGCACGCG
CTGACGCACT GGATCAACGC GCGCCTTCGC GCGCCGGTCG ATGTCATTGC GCCGCCCGAC
CGGATCGAGG GCCGTAGTCC GGCGACGCTC GCCGATCTCG CCCAGGCGCT CGACCGCGGC
AGCGTGACCT GCCTCGCCAT CCTCGGTGGC GATCCGGTCG CGACGGCACC GGCCGATCTC
GACCTTGCCC GGCGCATCGC CCGTGCCCGC TTCAGCGTCC ATGCCGGCTT GCACGGCGAC
GAGACCGCGG GAGCGACCCA CTGGCACCTG CCTCTGACGC ACGAGTTGGA GAGCTGGTCG
GATCTTCGCG CCACGGATGG CACGGTCAGC CTCGTCCAGC CGCTGCTGCG CCCCCTCTAC
GACGGGCGCT CGCTCCACGA GATCCTTCCG CTGTTCACCG GCCGCAGCGC GACGTCGGGC
TATGCGCTCG TGCGCGAGAC GTGGCGGGAG CGCGGCGGCG CCGATTTCGA GAGCTGGTGG
CGCCGCTGCC TGCATGACGG TGTCGTCGCC GACAGCGCCG CGCCCATCGT CGATCCCGGC
GAGCCGCGCC TGCCGACCCT TCCCGAGATC CACCTGGCCG AGAGGCTGAC GGTCGAGTTG
CGTCCCGACC CGTGCCTCTG GGACGGGCGC TTTGCCAACA ACGCGTGGCT TCAGGAATGC
CCGAAGCCGA TCTCGAAGCA GGTCTGGGGA AACGCGCTCG CGCTCTCACG CGCGGAAGCC
CGGCGGCGCG GGCTGGCGGC CGGCGACGTG GTGCGCGCGA GCGCGGGTGG ACGCTCGATC
GAGGTGCCGG TCATCATCGA GTCCGGCGTC GCCGAGAGGG TCGGCGTGCT GACACTCGGC
TACGGCCGCG AGCGGGCCGG CGCCATCGGC AACGGTATCG GTGCGAACGC CTACGGGCTG
ATGACGCAGG CGTCGCCTTG GCTCGTGACC GGCGTCGATC TCGCGAAGTC CGACCGAACC
GAAACGATCC TGCGCACGCA GAACTACGTC GAGATCGAGG GCGAGACCAA AAAGCTGTTC
CGGCAGATCG ATCTCGCCGC GCTGGCGAGC GCCGAGCCGA AGGGCATCGG CGCGGATCAG
CCGTCCCTGC TCGATCCGTG GAAGGGCGAT GCCGACGGCC ATGCCTGGGC GATGGTGATC
GACACCGATG CCTGCATCGG CTGCAACGCC TGCGTCGTCG CCTGCCAGTC CGAGAACAAC
GTGCCCGTGG TCGGCCCGGA AGAGATCGCG CGGGGCCGGA TGATGCATTG GCTGCGGGTC
GATATCTACG ACGAGGGCAG CCCGGAGGCG CCGCGCGCCG GGTTCCAGCC CGTGCCCTGC
ATGCATTGCG AGCACGCGCC CTGCGAACCG GTCTGCCCCG TCGCGGCCTC GGTCCATGAC
GGCGAGGGCC TGAACCTTCA GGTCTACAAT CGCTGCGTCG GCACCCGTTT CTGCGAGGCG
AACTGCCCCT ACAAGGTCCG CCGCTTCAAC TTCTTCGGCT ATGCCGACGG CCAGCCCTAC
GCCAATCTCG GCGCGGAATC GGTGAAGGCC CAGCGCAACC CCAACGTCAC CGTCCGCGCC
CGCGGCGTGA TGGAGAAGTG CACCTACTGC ATCCAGCGCA TCGCCACTGA GCGGCAGGCG
GCCGAGCGCG ACGGGCGCGA GATGAACCCT GTCGTCACCG CTTGCCAATC TGCTTGCCCG
ACGCGGGCGA TCCGGTTCGG CGACCTCGCC AAGCCCGGCA ACGCCATCAC CGAACTGCGC
AAGGACCCGC GCCACTACGC GTTGATGGAG GAACTGAACA CCCGCCCGCG CACGACCTAC
CTCGCCAACC TTCGCTCCCC GAACCCGGAC CTGAAGGAGG ATCGCGCGTG A
|
|---|
| Protein sequence | MPPLTPPSRR EALRLLGAGI TLAAGGCSKP VEEIVPYVRA PEQLLPGVPV RYATTLSLSG
WARGVHAIAV DGRPIKIEGN PLHPGSLGAT DVFAEAAILD LYDPDRSRTV TERVNGIASW
DMFERALSGP LSTVRGERGR GLHLVTGRVT SPTLARQIDA LLQALPEAVW HVHEAIDEAN
AERGAELAFG RPLRALPRLD RAETILCVGA DPLGAGPDQI RLARAFAERR RDPARFGRLY
VAESALTLTG VKADARRAVT PLEQAAILTS VANALGAGLA APDLPEAASR FAQAAAADLT
AHQGRALVLA GPALPPEWHA LTHWINARLR APVDVIAPPD RIEGRSPATL ADLAQALDRG
SVTCLAILGG DPVATAPADL DLARRIARAR FSVHAGLHGD ETAGATHWHL PLTHELESWS
DLRATDGTVS LVQPLLRPLY DGRSLHEILP LFTGRSATSG YALVRETWRE RGGADFESWW
RRCLHDGVVA DSAAPIVDPG EPRLPTLPEI HLAERLTVEL RPDPCLWDGR FANNAWLQEC
PKPISKQVWG NALALSRAEA RRRGLAAGDV VRASAGGRSI EVPVIIESGV AERVGVLTLG
YGRERAGAIG NGIGANAYGL MTQASPWLVT GVDLAKSDRT ETILRTQNYV EIEGETKKLF
RQIDLAALAS AEPKGIGADQ PSLLDPWKGD ADGHAWAMVI DTDACIGCNA CVVACQSENN
VPVVGPEEIA RGRMMHWLRV DIYDEGSPEA PRAGFQPVPC MHCEHAPCEP VCPVAASVHD
GEGLNLQVYN RCVGTRFCEA NCPYKVRRFN FFGYADGQPY ANLGAESVKA QRNPNVTVRA
RGVMEKCTYC IQRIATERQA AERDGREMNP VVTACQSACP TRAIRFGDLA KPGNAITELR
KDPRHYALME ELNTRPRTTY LANLRSPNPD LKEDRA
|
|---|
| |