Gene Mchl_0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_0118 
Symbol 
ID7114044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp112922 
End bp114163 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content67% 
IMG OID643522928 
Producttryptophan synthase subunit beta 
Protein accessionYP_002418996 
Protein GI218528180 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0133] Tryptophan synthase beta chain 
TIGRFAM ID[TIGR00263] tryptophan synthase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCTGA ACCCCGCTCC CAATTCCTTC CGCACCGGGC CGGATGAGCG CGGTCGCTTC 
GGCATCTTCG GCGGCCGCTT CGTGGCCGAG ACGCTGATGC CGCTGATTCT CGATCTCGAG
AAGGCCTATG CCGACGCCAA GGCCGACCCG TCGTTCAAGG CGGATATGGA ATCCTACGGC
ACCCACTACA TCGGCCGACC GAGCCCGCTC TACTTTGCCG AGCGCTTGAC CGAGCATCTG
CGCGCCCAGG CCCCGGCGGG GCAGGGGGCG AAGATCTTCT TCAAGCGCGA GGAGCTGAAT
CACACTGGCT CGCACAAGGT GAACAACGTC CTCGGCCAGA TCCTGCTCGC CCGCCGCATG
GGCAAGCCGC GGATCATCGC CGAGACCGGC GCGGGCCAGC ACGGCGTCGC GACGGCGACG
CTCTGCGCCC GCTTCGGCCT GAAATGCGTG GTCTATATGG GCGCCGTCGA TGTCGAGCGG
CAGGCCCCGA ACGTGTTCCG CATGAAGATG CTCGGTGCCG AGGTGATCCC GGTGCAATCC
GGCACGCGCA CGCTCAAGGA CGCGATGAAC GAGGCCCTGC GCGACTGGGT CACCAACGTC
TCCGACACCT TCTACTGCAT CGGCACCGTG GCCGGCCCCC ATCCCTATCC GGCAATGGTG
CGCGATTTCC AATCGGTGAT CGGCATCGAG ACGAAGCAGC AGATGCTTGA AATGGAGGGC
CGCCTGCCGG ACTCGCTCAT CGCCTGCATC GGCGGCGGCT CGAACGCCAT GGGCTTGTTC
CACCCCTTCC TCGATGACCG CGACGTCGAA ATCTACGGCG TCGAGGCAGC CGGGCACGGC
GTGCAGAGCG GCCTCCACGC CGCCTCGCTC ACCGGCGGCC GCCCGGGCGT GCTGCACGGC
AACCGCACCT ACCTGCTGAT GAACGAGGAC GGCCAGATCG CCGACGCCCA CTCGATCTCG
GCGGGCCTCG ATTATCCCGG TATCGGCCCC GAACACGCAT GGCTGCACGA GATGGGCCGG
GTCACCTATC TGTCGGCGAC CGATGCGGAG ACGCTGGAGG CGTTCAAGCT CTGCTCGATG
CTGGAAGGCA TCATCCCGGC TCTGGAGCCC GCGCACGCGC TGTCGAAGGT GATGGAACTG
GCGCCGACCA AGCCGGCGGA GCACCTGATG GTGCTGAACC TCTCCGGCCG CGGCGACAAG
GACATCCCGC AGGTGGCGCA GATCTTCGGT CAGACGCTCT GA
 
Protein sequence
MTLNPAPNSF RTGPDERGRF GIFGGRFVAE TLMPLILDLE KAYADAKADP SFKADMESYG 
THYIGRPSPL YFAERLTEHL RAQAPAGQGA KIFFKREELN HTGSHKVNNV LGQILLARRM
GKPRIIAETG AGQHGVATAT LCARFGLKCV VYMGAVDVER QAPNVFRMKM LGAEVIPVQS
GTRTLKDAMN EALRDWVTNV SDTFYCIGTV AGPHPYPAMV RDFQSVIGIE TKQQMLEMEG
RLPDSLIACI GGGSNAMGLF HPFLDDRDVE IYGVEAAGHG VQSGLHAASL TGGRPGVLHG
NRTYLLMNED GQIADAHSIS AGLDYPGIGP EHAWLHEMGR VTYLSATDAE TLEAFKLCSM
LEGIIPALEP AHALSKVMEL APTKPAEHLM VLNLSGRGDK DIPQVAQIFG QTL