| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_0089 |
|---|
| Symbol | |
|---|
| ID | 7114013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 84326 |
|---|
| End bp | 85264 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643522903 |
|---|
| Product | homocysteine S-methyltransferase |
|---|
| Protein accession | YP_002418973 |
|---|
| Protein GI | 218528157 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2040] Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.898737 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCGAT ATCGAACCGC TCTCCCTCAA TTGGACGGCC ATGTCTTTCT GACCGACGGC
GGCCTTGAGA CCACGCTCGT CTTCCACGAG GGTCTTGAGC TGACCTGTTT TGCGGCCTTC
CCGCTCGTGT GTACGGAAGA GGGCCGAGAT AAGCTCACGC ACTACTTCCA ACCGTATCTG
GATCTGGCGG AGGAGCGCCA GCTGGGCTTT ATCCTGGATA CGCCAACGTG GCGGGCCAAT
CCTGACTGGG GTGCGCAACT TGGCTTCACC GGGCAGGCCC TTACAGACGT CAGTCGCGCC
GCCGTCACAT ATCTCGAAGG ACTCCGGCGT CGGCACGCCC ACAGTGGGCT GCCAATCGTG
CTCAATGGAG TCATCGGGCC TCGAGGCGAC GGGTACAAGA TAGAGACCTC ACTGACAGCG
GCAGAGGCCG CCACTTACCA CGGCCCACAG ATCCAGGCGT TCCGAGACAC TGAGGCCGAC
ATGGTCAGTG CGATCACCAT GACTTCGGTG GAGGAAGCAA TTGGTATCGC TTGGGCGGCC
CAGACAGCCG GCATGCCGGT CGTAATATCC TTCACGGTGG AGACGAACGG CCGACTGCCA
TCTGGCCAAG CTCTCGGCTC TGCAATCGAG GAGGCTGATG GGACCACGGG GGCTTACCCC
GCCTACTACA TGATCAACTG CGCCCACCCG ACACATTTCA AGGCTGTGCT TGTCGGCAAT
GCACCTTGGC TTAACCGCAT TCGTGGCCTA CGAGCGAATG CCTCTGCGAA GAGCCACGCT
GAACTCGATG TGGCATCTGA ACTGGACATC GGCGATCCAC AGGAGCTTGG CCTGCATTAT
GCCGATCTTT GCGCTAGGCT AAGAAGTCTA AAGATTCTTG GCGGTTGCTG CGGAACGGAC
CGCCGGCATG TGGCAGCGAT CTGTGATGCA TGCTTATGA
|
|---|
| Protein sequence | MPRYRTALPQ LDGHVFLTDG GLETTLVFHE GLELTCFAAF PLVCTEEGRD KLTHYFQPYL
DLAEERQLGF ILDTPTWRAN PDWGAQLGFT GQALTDVSRA AVTYLEGLRR RHAHSGLPIV
LNGVIGPRGD GYKIETSLTA AEAATYHGPQ IQAFRDTEAD MVSAITMTSV EEAIGIAWAA
QTAGMPVVIS FTVETNGRLP SGQALGSAIE EADGTTGAYP AYYMINCAHP THFKAVLVGN
APWLNRIRGL RANASAKSHA ELDVASELDI GDPQELGLHY ADLCARLRSL KILGGCCGTD
RRHVAAICDA CL
|
|---|
| |