| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_0086 |
|---|
| Symbol | |
|---|
| ID | 7114010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 80614 |
|---|
| End bp | 81936 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643522900 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_002418970 |
|---|
| Protein GI | 218528154 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.55309 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACCC CTGCAAACGC CCCAGCCGAG CGCTACCAGC TGTTCCAGCG CGCCGGCAGC
ACTCGGTGGC AGGTGCGCTT CAGCATCAAG GGTCAGGGGC AGTTCAAGCG TTCTCTCGAC
ACGGATGACG AGCGGGAGGC AGAGCGCCGT GCCGAGGCCA TCTGGTACGA GGCTACCTAC
CGCGCCAAGC AGGGGCTCAC GGCCAAGACC CATACCTTCG GGAGCGTAGC AGAGAGCTAC
ATCGCGCAGA TCCTCCGGGA GGTGGAGCGC GGGGAGCGCC GTGCGGATCA GGGCAAGAGC
GAACCCGCCG TGATTCGCCG CTACTTCGTG AGCTACTTCG GTGACAAGCC GGTCGACGCG
GTCACCGAGG CCGATCTCGA GCGCTACGCG GAGTGGCGGC GCACCTACTG GACCCAGGGC
CCTGGCAAGC TCATCACGCA CATCGAATAC GAGCGCGACG GCCACCGTCT GCGCCGGCCT
GTACGACGCT CTGCGCCGTC CCTGAGCCGC CAGCGCGGGG AGACCGTGGT GCTGCGTGGG
TTGCTGCGTT GGGCCGCTCG GCAGGGCTAC ATGAAGACCC CGCCGGAAAT CAGCATCAAG
GCGCGTCGCT CGCCCGACAA TCGACGGCCT AGCTTTGAGC CGCACGAGTT CGCTCGGCTG
GAGGCGGTGA GCCTCAGCCG GCTGGTGGAC CCCATCATGG ATGGCACGGG CGCTGAGGTC
CGAGCTTGCG ACCGGCGCAG CTGGCGCATC AAACGGTTGG ACGACCACAC GCGGCGTGAT
CGCACCGTGC TGCACGCGTA CGTGATGACC GGCGCGTTCT CAGGGCTACG CCCTACCGAG
ATGTACAATC TCACCTGGGG CGACGTGCTG GGCTACCGCG CTGGCAGGAA AAAGAGCGTG
GATGATCGAG ACATCCGGCT GCAGGTGCGT GGCAAGGGCA AGAGCGGCAA GGCGATTCCG
CAGAAGGCGG CAATCCCGTG GTTCGACACG TTGTGGATGC TGTTCGAGCG CAGCCTCGGC
CGGGAACCAG CTGATTCGGA CCCGGTGTTT GCCAGCGAGA CGGGCAAGCG CATCACCTCG
GTCGCGAATG GCTTCACCGA GCTGCTCAAG GCAGCAGGAC TGGAACGGGA TCACCGCGGC
ATCAAGCGCA CGCCGTACTC GCTGCGCCAC TTCTACATCA GCGAGCAGCT GGCGAACGGG
GCCGAGGTGC TCGACGTGGC ACGAAACTGC CGCACATCGT TGGTGATGAT CGACAAGCAC
TATGGCCAGG TACGCCTTGA GCGCGTGGTG GATCGGCTAC GACCGGAGTG GACACGCGCA
TAA
|
|---|
| Protein sequence | MSTPANAPAE RYQLFQRAGS TRWQVRFSIK GQGQFKRSLD TDDEREAERR AEAIWYEATY
RAKQGLTAKT HTFGSVAESY IAQILREVER GERRADQGKS EPAVIRRYFV SYFGDKPVDA
VTEADLERYA EWRRTYWTQG PGKLITHIEY ERDGHRLRRP VRRSAPSLSR QRGETVVLRG
LLRWAARQGY MKTPPEISIK ARRSPDNRRP SFEPHEFARL EAVSLSRLVD PIMDGTGAEV
RACDRRSWRI KRLDDHTRRD RTVLHAYVMT GAFSGLRPTE MYNLTWGDVL GYRAGRKKSV
DDRDIRLQVR GKGKSGKAIP QKAAIPWFDT LWMLFERSLG REPADSDPVF ASETGKRITS
VANGFTELLK AAGLERDHRG IKRTPYSLRH FYISEQLANG AEVLDVARNC RTSLVMIDKH
YGQVRLERVV DRLRPEWTRA
|
|---|
| |