Gene Mchl_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_0025 
Symbol 
ID7114084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp27765 
End bp29411 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content68% 
IMG OID643522851 
Productmalonate decarboxylase, alpha subunit 
Protein accessionYP_002418922 
Protein GI218528106 
COG category[I] Lipid transport and metabolism 
COG ID[COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase 
TIGRFAM ID[TIGR01110] malonate decarboxylase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGTT GGGGTCGAGA ACGGGTGGCC CGCGATGCGC GGATCGAGGC GGGTCGGGCC 
CATGCCGCGG GCAAGGTCGT GACGGCGGCC GACGTGGTCG CTCTCCTGGA GGCGATCCTT
CAGCCCGGCG ACCGGGTCTG TCTGGAGGGC GACAACCAGA AGCAGGCGGA TTGCCTCGCG
CGGGGCTTGA GCCAGTGCGA CCCCGCCCGC GTGCACGATC TGCACATGGT CCAGTCGGGC
ATCGTGCTGC CCGAGCATCT CGACATCTTC GAGCAGGGGA TCGCGAAGCG CCTCGACTAT
TCCTATTCGG GGCCGCAGGG CGCGCGCATC GCCCGCATGC TCTATGGCGG TCAGATCAAG
CTTGGGGCGG TGCACACCTA TCTCGAGCTG TTCGCCCGCT ACTTCGTCGA TCTGACCCCG
AACGTGGCGC TGATCGCCGG CGTCTCGGCC GACCAGGACG GCAACCTCTA TACCGGGCCG
AACACCGAGG ACACGCCGAC TGTGGTGGAG GCGACCGCCT TCAAGAACGG CGTCGTGGTG
GCGCAGGTCA ACGAGATCGT CGATCGCGTG CCCCGCGTCG ACATCCCCGG CGACCGGATC
GACTTCGTGG TCGAGGCCGA CAAGCCGTTC TACGTCGAGC CACTCTTCAC CCGTGATCCG
GCGGCGATGA CGGAGACGCA GATCCTGATG GCCATGATGG CGATCAAGGG AATCTACGCC
GAGTACGGCA TCCGCCGGCT CAACCACGGC ATCGGCTTCG GCACGGCGGC GATCGAATTG
CTGCTGCCGA CCTATGCCGA ACGCCTCGGC CTGAAGGGTC AGATCGCCAC CCACTGGGCG
CTCAACCCGC ATCCAACCCT GATCCCGGCG ATCGAATCGG GCTGGGTGAA ACAAGTTCAT
TGCTTCGGCT CCGAAGTTGG CATGGACCGC TATATCCGCG AGCGCTCCGA CATCTTCTTC
ACCGGCGCCG ACGGTTCGCT CCGCTCGAAC CGGGCCTTCT GCCAGACGGC CGGACTCTAC
GCCTGCGACC TGTTCATCGG CTCGACCCTG CAGATCGACC TCGCCGGTCA TTCCTCGACG
GTGACGCAGA ACCGCGTGGC GGGCTTTGGC GGCGCGCCGA ACATGGGCTC GGACCCGCAC
GGCCGGCGCC ACCCCTCCGA CACCTGGATG AAGGCGGGGC GCGAGGCGCA GGTCACCGGC
GATCCCGCCC TGATGCGCGG GCGCAAGCTC GTGGTGCAGA TCGTCGAAAC CTTCGGCGAG
GGGCTGGTGC CGGCCTTCGT CGAGCAACTC GATGCGCTCG AACTGGCGCG TAAGATCGGC
TTGGAGCTGG CTCCGGTGAT GGTCTACGCC GACGACGTCA CCCACATCGT CACCGAGGAA
GGCATCGCCA ACCTCCTGCT CTGCCGCACC GCCGACGAGC GCGAACAGGC GATCCGCGGG
GTGGCCGGCT ACACCGAGAT CGGCCGCGGG CGTGACCGGG CCATGGTCGA GCGTCTGCGC
CAGCGCGGCA TCGTGCGCCG CCCGGAGGAT CTCGGCATCG AACCCCTCGA CGCCGACCGC
TCCCTGCTCG CGGCGCGATC GATCAAGGAT CTCGTGCACT GGTCCGGCGG TCTCTACGAG
CCGCCGGCGA AGGTCCGGAA CTGGTGA
 
Protein sequence
MSGWGRERVA RDARIEAGRA HAAGKVVTAA DVVALLEAIL QPGDRVCLEG DNQKQADCLA 
RGLSQCDPAR VHDLHMVQSG IVLPEHLDIF EQGIAKRLDY SYSGPQGARI ARMLYGGQIK
LGAVHTYLEL FARYFVDLTP NVALIAGVSA DQDGNLYTGP NTEDTPTVVE ATAFKNGVVV
AQVNEIVDRV PRVDIPGDRI DFVVEADKPF YVEPLFTRDP AAMTETQILM AMMAIKGIYA
EYGIRRLNHG IGFGTAAIEL LLPTYAERLG LKGQIATHWA LNPHPTLIPA IESGWVKQVH
CFGSEVGMDR YIRERSDIFF TGADGSLRSN RAFCQTAGLY ACDLFIGSTL QIDLAGHSST
VTQNRVAGFG GAPNMGSDPH GRRHPSDTWM KAGREAQVTG DPALMRGRKL VVQIVETFGE
GLVPAFVEQL DALELARKIG LELAPVMVYA DDVTHIVTEE GIANLLLCRT ADEREQAIRG
VAGYTEIGRG RDRAMVERLR QRGIVRRPED LGIEPLDADR SLLAARSIKD LVHWSGGLYE
PPAKVRNW