Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_0025 |
Symbol | |
ID | 7114084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | + |
Start bp | 27765 |
End bp | 29411 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643522851 |
Product | malonate decarboxylase, alpha subunit |
Protein accession | YP_002418922 |
Protein GI | 218528106 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
TIGRFAM ID | [TIGR01110] malonate decarboxylase, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGGTT GGGGTCGAGA ACGGGTGGCC CGCGATGCGC GGATCGAGGC GGGTCGGGCC CATGCCGCGG GCAAGGTCGT GACGGCGGCC GACGTGGTCG CTCTCCTGGA GGCGATCCTT CAGCCCGGCG ACCGGGTCTG TCTGGAGGGC GACAACCAGA AGCAGGCGGA TTGCCTCGCG CGGGGCTTGA GCCAGTGCGA CCCCGCCCGC GTGCACGATC TGCACATGGT CCAGTCGGGC ATCGTGCTGC CCGAGCATCT CGACATCTTC GAGCAGGGGA TCGCGAAGCG CCTCGACTAT TCCTATTCGG GGCCGCAGGG CGCGCGCATC GCCCGCATGC TCTATGGCGG TCAGATCAAG CTTGGGGCGG TGCACACCTA TCTCGAGCTG TTCGCCCGCT ACTTCGTCGA TCTGACCCCG AACGTGGCGC TGATCGCCGG CGTCTCGGCC GACCAGGACG GCAACCTCTA TACCGGGCCG AACACCGAGG ACACGCCGAC TGTGGTGGAG GCGACCGCCT TCAAGAACGG CGTCGTGGTG GCGCAGGTCA ACGAGATCGT CGATCGCGTG CCCCGCGTCG ACATCCCCGG CGACCGGATC GACTTCGTGG TCGAGGCCGA CAAGCCGTTC TACGTCGAGC CACTCTTCAC CCGTGATCCG GCGGCGATGA CGGAGACGCA GATCCTGATG GCCATGATGG CGATCAAGGG AATCTACGCC GAGTACGGCA TCCGCCGGCT CAACCACGGC ATCGGCTTCG GCACGGCGGC GATCGAATTG CTGCTGCCGA CCTATGCCGA ACGCCTCGGC CTGAAGGGTC AGATCGCCAC CCACTGGGCG CTCAACCCGC ATCCAACCCT GATCCCGGCG ATCGAATCGG GCTGGGTGAA ACAAGTTCAT TGCTTCGGCT CCGAAGTTGG CATGGACCGC TATATCCGCG AGCGCTCCGA CATCTTCTTC ACCGGCGCCG ACGGTTCGCT CCGCTCGAAC CGGGCCTTCT GCCAGACGGC CGGACTCTAC GCCTGCGACC TGTTCATCGG CTCGACCCTG CAGATCGACC TCGCCGGTCA TTCCTCGACG GTGACGCAGA ACCGCGTGGC GGGCTTTGGC GGCGCGCCGA ACATGGGCTC GGACCCGCAC GGCCGGCGCC ACCCCTCCGA CACCTGGATG AAGGCGGGGC GCGAGGCGCA GGTCACCGGC GATCCCGCCC TGATGCGCGG GCGCAAGCTC GTGGTGCAGA TCGTCGAAAC CTTCGGCGAG GGGCTGGTGC CGGCCTTCGT CGAGCAACTC GATGCGCTCG AACTGGCGCG TAAGATCGGC TTGGAGCTGG CTCCGGTGAT GGTCTACGCC GACGACGTCA CCCACATCGT CACCGAGGAA GGCATCGCCA ACCTCCTGCT CTGCCGCACC GCCGACGAGC GCGAACAGGC GATCCGCGGG GTGGCCGGCT ACACCGAGAT CGGCCGCGGG CGTGACCGGG CCATGGTCGA GCGTCTGCGC CAGCGCGGCA TCGTGCGCCG CCCGGAGGAT CTCGGCATCG AACCCCTCGA CGCCGACCGC TCCCTGCTCG CGGCGCGATC GATCAAGGAT CTCGTGCACT GGTCCGGCGG TCTCTACGAG CCGCCGGCGA AGGTCCGGAA CTGGTGA
|
Protein sequence | MSGWGRERVA RDARIEAGRA HAAGKVVTAA DVVALLEAIL QPGDRVCLEG DNQKQADCLA RGLSQCDPAR VHDLHMVQSG IVLPEHLDIF EQGIAKRLDY SYSGPQGARI ARMLYGGQIK LGAVHTYLEL FARYFVDLTP NVALIAGVSA DQDGNLYTGP NTEDTPTVVE ATAFKNGVVV AQVNEIVDRV PRVDIPGDRI DFVVEADKPF YVEPLFTRDP AAMTETQILM AMMAIKGIYA EYGIRRLNHG IGFGTAAIEL LLPTYAERLG LKGQIATHWA LNPHPTLIPA IESGWVKQVH CFGSEVGMDR YIRERSDIFF TGADGSLRSN RAFCQTAGLY ACDLFIGSTL QIDLAGHSST VTQNRVAGFG GAPNMGSDPH GRRHPSDTWM KAGREAQVTG DPALMRGRKL VVQIVETFGE GLVPAFVEQL DALELARKIG LELAPVMVYA DDVTHIVTEE GIANLLLCRT ADEREQAIRG VAGYTEIGRG RDRAMVERLR QRGIVRRPED LGIEPLDADR SLLAARSIKD LVHWSGGLYE PPAKVRNW
|
| |