Gene Mchl_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_0019 
Symbol 
ID7114078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp20115 
End bp22160 
Gene Length2046 bp 
Protein Length681 aa 
Translation table11 
GC content69% 
IMG OID643522846 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_002418917 
Protein GI218528101 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.746553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCCA CCGAGGAGCG CGTCCTGATC CTGACACCAC GCGGGCGCGA TGCCGCGGTG 
ATCGAGGGGG TGCTGGACCG TTCGGGCATT CACGCCACGG TTTGCGCGAA CGTCTCGGCG
TGGTTGAAGG GGCTGCGCGA GGGGGCCGGA ACCGCTCTTG TGACCGAGGA GGCTCTGGCC
GACGGCGACA CGGCGGACGT GTTCGCGTGG CTCGATGCGC AACAGCCCTG GTCGGACTTC
CCCTTCATCG TGCTGGCGAC GCGCCAAGCC GGCCGTCGCA CCCAGAGCGC GGCGGAATTG
CTGCGGCGGC TCGGCAACGT GGTTCTGCTG GAACGCCCGA TCAACGCCGA GACGCTGACC
AGCGCCGTCG TCTCGTCCCT GCGTGCGCGC CGTCGCCAAT ACCAAGCCCG GCAGCATCTG
CTGGAGCGGG AGCGTGCGCA GGAACAACTC CGGCTGGCCA ACGAGGAGTT GGAGCGCCGT
GTCGCCGAGC GGACGCGGGA GGTCGAGACC GCCCACGAGA CCCTCGCCTT CGCGCTCGAT
GCCGCCGGCA TGAGTTCGTG GGACATCGAC TACGCCGCCG GAACCCATCG CCGCTCGCCC
CGCTTCGATG CCGTCTTCGG CTACGCGGAC ACAGGACAGT CCTGGGACCG CGAGACATTC
CTGGCCCATG TCGTCGACGA AGACCGCGAG ACGGCCGAGG ACGCCTTCGC GAACGTCCCT
AAGACGGGCC GGCTCGACCT CGAATGCCGC ATCCGGCGCG CGGACGGAGC GGTGCGCTGG
ATTGCGATGC GGGGGCGGGT CAAATCCGGC GAGGCCGATA GGCCGGAGCG GATCGCTGGC
ATCCTGATGG ATCGCACGGA TCAGCACGTC ACGGAGGAGG CGCTGCGCCA AGCCCAGAAG
ATGGAGGCGA TCGGCCAGCT CACGGGCGGT GTGGCGCACG ATTTCAACAA CCTGCTTACC
GTCATCGTCG GCGGCCTCGA CATGATGCTG CGCCGCCCCG ACCAACCCGA CCGGGTGAAG
CGGCTGGCCG AAGCGGCGAT GGGTGCGGCG CGCCGCGGCG AGCAGCTCAC CCAGCAGCTC
CTCGCCTTCT CGCGCCGCCA GATGCTGCGG CCGCAGACGC TCAACCCGAA CCGGCTGCTG
CTGGATTTCC GGCCGCTCGC CGAGCGCGCG GCGACCGGTG CCGTCGAATT GGCCTTCGAT
CTCGACCCGG CCCTCGACCC GATCCGCATC GATCCGGCCC AGTTCGAGTC GGCCGTGCTG
AACCTGATCG TGAACGCGCG CGACGCTCTG GAGGGCAGGG GGGGCCACGC GCGCATCGCG
GTCACGAGCC GCAACGTCCG GCTCGGCACG GCGGCGGTGG CAGACCGGGG CGTTCCCCCG
GGCCCTTACG TCGTCATCTC GGTGACGGAT ACCGGCAGCG GCATCCCGCC CGACAAGCTT
CAACGCGTCT TCGAGCCGTT CTTCACCACC AAGGAGGTCG GCAAGGGCAC CGGCCTCGGG
CTCAGCCAGG TCTACGGATT CACCCGCAGC GCCAAGGGGT TCGCGCAGAT CGAATCGGAG
GTCGGCAAAG GCACGACGGT CAGCCTGTAC TTTCCACGCT CGACCGACCC GGCCGGTGAG
GAGATCGGGC CCGGACCGGT CGGCGCCATT CCGCTGCGCC GAGCCGGGGA GGGCGAGACG
GTGCTGCTGG TCGAGGACGA CGAGCAGGTG CTCGGCATGG CCGTCGAAAG CCTGGAAGAG
CTTCGTTATC GAGTTATCGT CACCCGCAAT GCGGCCGAGG CGCTGGAGCA TCTGCACGGC
GTCGAGCGGA TCGACATCCT GTTCTCGGAC GTCGTCATGC CCGGCGGCAT GAATGGCTCG
CAACTCGCCG TCGAGGCGCG GCGGGTGCGC CCGGACATCA AGATCCTGCT GACCTCGGGC
TATGTGGCGA ATCTCGATGA GGGGCAGGTG ATCGGCCAGG GCGAGCTTCC GGTGCTCAAC
AAGCCCTACC GGCGCGACGA ACTCGCCCGG TCGCTCCGCC TGGTGCTCGG CGGCGAAAGG
GCCTGA
 
Protein sequence
MSSTEERVLI LTPRGRDAAV IEGVLDRSGI HATVCANVSA WLKGLREGAG TALVTEEALA 
DGDTADVFAW LDAQQPWSDF PFIVLATRQA GRRTQSAAEL LRRLGNVVLL ERPINAETLT
SAVVSSLRAR RRQYQARQHL LERERAQEQL RLANEELERR VAERTREVET AHETLAFALD
AAGMSSWDID YAAGTHRRSP RFDAVFGYAD TGQSWDRETF LAHVVDEDRE TAEDAFANVP
KTGRLDLECR IRRADGAVRW IAMRGRVKSG EADRPERIAG ILMDRTDQHV TEEALRQAQK
MEAIGQLTGG VAHDFNNLLT VIVGGLDMML RRPDQPDRVK RLAEAAMGAA RRGEQLTQQL
LAFSRRQMLR PQTLNPNRLL LDFRPLAERA ATGAVELAFD LDPALDPIRI DPAQFESAVL
NLIVNARDAL EGRGGHARIA VTSRNVRLGT AAVADRGVPP GPYVVISVTD TGSGIPPDKL
QRVFEPFFTT KEVGKGTGLG LSQVYGFTRS AKGFAQIESE VGKGTTVSLY FPRSTDPAGE
EIGPGPVGAI PLRRAGEGET VLLVEDDEQV LGMAVESLEE LRYRVIVTRN AAEALEHLHG
VERIDILFSD VVMPGGMNGS QLAVEARRVR PDIKILLTSG YVANLDEGQV IGQGELPVLN
KPYRRDELAR SLRLVLGGER A