Gene Mchl_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_0010 
Symbol 
ID7114069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp9896 
End bp12097 
Gene Length2202 bp 
Protein Length733 aa 
Translation table11 
GC content70% 
IMG OID643522837 
Producthelicase, RecD/TraA family 
Protein accessionYP_002418908 
Protein GI218528092 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID[TIGR01448] helicase, putative, RecD/TraA family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.381195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.357387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGC CCCTCCGCTC CTCGGCCGTC GATGGTGCCG CGTCCCTCGA CATGCTCGCC 
GGCTCGGTCG AGCGGGTGAC GTTCCACAGC GCCGAGACCG GCTTCTGCGT CCTCAAGGTC
CATGCCCGCG GCCGGCGCGA CCTCGTGCCG GTGGTGGGCC ATGCGCCCGC CATCGCCGCC
GGCGAGTGGC TGACGGCTTC CGGGCGATGG GTCACGGACC GTGAGCACGG CCTCCAGTTC
CGCGCCGACA CGCTCCAAGT GACGCCGCCC ACGGGGATCG AGGGCATCGA GCGCTACCTC
GCATCCGGGC AGATGCGCGG CATCGGCCCG ATGATGGCCA AGCGCATCGT CGCCCGCTTC
GGGGAGGCGG TGTTCGAGAT CATCGAAGCC GAGCCCGCCC GCCTCACCGA GGTCGAGGGC
ATCGGCCGCA AGCGCGCCGC GCGCATCGTC AAGGGCTGGG CCGAGCAGAA GGCCGTGCGG
GAGATCATGA TCTTCCTGCA CGCCCACGGC GTCGGCACCG CTCGGGCGAC CCGGATCTTC
CGCACCTATG GCGGGGATTC CCTGAAGGTC ATGGCCGAGG ATCCCTATCG GCTCGCCCGC
GACATCCGCG GCATCGGCTT CCGCACGGCG GACGCCATCG CCCTGCGCCT CGGCCTCGCC
CGCGACGCGC CGCAGCGGCT TGCTGCCGGT GTCTCCTACG CACTCCAGAC GGCGATGGAT
GAGGGCCATT GCGGGCTTCC CGCCGAGCGG CTGGTGCGCC TCGCTGCCGA GCTTCTCGAC
GTCGCGCCCG ATCTCGTCCG GCTCGCCGCG GCGCTCGTCC TGCGCGAGGG CCGCGAGGTC
GTCGCGGATA CGCTGCGCGG CGAGCCCTGC CTGTTCCTCA AGGGCCTGCA CGGCGCCGAG
CGCGTCATCG CGATGCGGCT GGCCGAGCGC GCCGCCGGCC CCCCACCCTG GGCCGCGATC
GACTTCGCGC TGGCCAGGCC CTGGGTCGAG GCGAAGACCG GAAAGACGCT GTCCGCCTCG
CAGGCTGAGG CGGTCGGGCT GGTGCTCCGC TCGAAGCTCT GCGTTCTCAC CGGCGGCCCC
GGCGTCGGCA AGACCAGCAC CCTCGACGCG ATCCTGCGCA TCCTCACCGC CAAGGGCGTA
CGGGTGCTGC TCGCCGCCCC CACCGGCCGC GCGGCCAAGC GCATGGCCGA GCAGACCGGG
CTGGAAGCAC GCACGCTCCA TCGCCTGCTG GAGATCGACC CGCGCAATGG CGGCTTTCAG
CGCAACGAGG AAAACCCGCT CGATTGCGAT CTCCTCGTCA TCGACGAGAC CTCAATGGTC
GACGTGCCGC TGATGCATGC CCTCCTCAAG GCGGTGCCGG AGCGAGCGGG CCTGATCCTC
GTCGGTGATG TCGACCAGCT TCCCTCGGTC GGACCCGGAC AGGTGCTGGC CGACGTGATT
GCCTCCGGGA CGGTGCCGGT GGCGCGTCTC ACCGAGATTT TTCGTCAGGC GGCGCAGAGC
CGGATCGTCG TCAACGCCCA CAGCATCAAC ACCGGGCGGA TGCCGGCTGC GCCCGCCAAG
GGCGAAGACA GCGACTTTTA CCTCGTCGAG ATCGAGGACG CGGACGAGGG CGTGGAGACG
CTGATCGAAC TCGTCACCCG CCGCATCCCC CGCCGCTTCG GCCTCGATCC CACCCACGAC
ATCCAAGTGT TGACGCCGAT GATCCGCGGC TCGCTCGGCA GCCGCAACCT CAACAACGCC
CTTCAGCGCG TGTTGAATCC GTCGCCCTCG GCGGAGGTCG AGCGCTTCGG CTGGCGCTTT
GCGCCCGGCG ACCGGGTGAT GGAGACCCGC AACGACTACG ACCGCGACGT GTTCAACGGC
GACCTCGGTA CGATCAGCGC CATCGATGCG GAGGAAGAGG CGCTCGTTGT CGATTTCGAC
GGTCGCGCGG TGATCTACCC CTTCAACGAA CTCGACACGC TGGTGCCGGC CTTCGCCACG
ACGATCCACA AGGCGCAGGG CTCGGAATAT CCGGCCGTGG TGATCCCGGT GGTGACCCAG
CATCGTACGA TGCTGGCGCG CAACCTGCTC TATACCGGCG TCACCCGCGG GCGCCGCCTC
GTTGTGCTGA TCGGCCAGCG CCGGGCCCTT GCGATGGCGG TCCGCGAAGG GGCCTCGCGG
CGGCGCTGGA CCAAGCTGCG AGAGTGGCTG GACGCCGCCT GA
 
Protein sequence
MNTPLRSSAV DGAASLDMLA GSVERVTFHS AETGFCVLKV HARGRRDLVP VVGHAPAIAA 
GEWLTASGRW VTDREHGLQF RADTLQVTPP TGIEGIERYL ASGQMRGIGP MMAKRIVARF
GEAVFEIIEA EPARLTEVEG IGRKRAARIV KGWAEQKAVR EIMIFLHAHG VGTARATRIF
RTYGGDSLKV MAEDPYRLAR DIRGIGFRTA DAIALRLGLA RDAPQRLAAG VSYALQTAMD
EGHCGLPAER LVRLAAELLD VAPDLVRLAA ALVLREGREV VADTLRGEPC LFLKGLHGAE
RVIAMRLAER AAGPPPWAAI DFALARPWVE AKTGKTLSAS QAEAVGLVLR SKLCVLTGGP
GVGKTSTLDA ILRILTAKGV RVLLAAPTGR AAKRMAEQTG LEARTLHRLL EIDPRNGGFQ
RNEENPLDCD LLVIDETSMV DVPLMHALLK AVPERAGLIL VGDVDQLPSV GPGQVLADVI
ASGTVPVARL TEIFRQAAQS RIVVNAHSIN TGRMPAAPAK GEDSDFYLVE IEDADEGVET
LIELVTRRIP RRFGLDPTHD IQVLTPMIRG SLGSRNLNNA LQRVLNPSPS AEVERFGWRF
APGDRVMETR NDYDRDVFNG DLGTISAIDA EEEALVVDFD GRAVIYPFNE LDTLVPAFAT
TIHKAQGSEY PAVVIPVVTQ HRTMLARNLL YTGVTRGRRL VVLIGQRRAL AMAVREGASR
RRWTKLREWL DAA