Gene Mchl_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_0003 
Symbol 
ID7114062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3266 
End bp4387 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content68% 
IMG OID643522830 
ProductDNA polymerase III subunit beta 
Protein accessionYP_002418901 
Protein GI218528085 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.991791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.512948 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTCA CAGTCGAGCG CGCGGCCCTC CTGAAATCGC TCGGCCACGT GCACCGGGTG 
GTGGAGCGGC GCAACACGAT TCCGATCCTC TCCAACGTCC TGCTGCGCAC CGGCGAGAAC
GGCCTCCAGC TCAAGGCGAC CGACCTCGAT ATCGAGGTGA CCGAGACCGT GGCCGCCGAC
GTGCTCGATG CCGGCGCCAC CACGGTGCCG GCCCACGTCA TCTACGATAT CGTTCGCAAG
CTGCCCGAGG GCGCGCAGGT CTCGCTGGAG ACCTCCGGTG AGACGGGCCA GATGACGATC
CGTTCCGGCC GCTCGCGCTT CGCGCTGGGC GCCCTGCCGG AGGGCGATTT CCCCGATCTC
GCCGCGGGCG AGCTGCCGCA TTCGTTCGCC ATTCCGGCGG CCGAGCTGAA GCAGCTCATC
GAGAAGACGC AGTTCGCGAT TTCCACCGAG GAGACGCGCT ACTACCTCAA CGGCATCTAC
TTCCACACCC TCGAGGTCGA GGGTGCCTTG AAGCTGCGCG CCGTGGCGAC CGACGGGCAC
CGGCTCGCCC GCGTCGAGAC CGAGGCGCCC GAGGGCAGCC GCGGGATGCC GGGCATCATC
GTGCCGCGCA AAGCCGTCGC CGAGATCCAG AAGCTCGTCG ACGACGGCGG CGAGAGCGTG
CAGGTCGAGC TGTCCCCGGC CAAGATCCGC CTGACGTTTG CGGGCGGCGT GATCCTGATC
TCGAAGCTGA TCGACGGCAC CTTCCCCGAC TATCAGCGGG TGATTCCCAC CGGCAACGAC
AAGCGCCTGA CGGTTGAGCG CGACGCCTTC GCGAAGGCGG TGGACCGCGT CTCGACCATT
TCCTCCGAGC GCGGCCGCGC CGTGAAGCTC GCCGTGAGCG AGGGGCGCCT TGCCTTGTCC
GTGACCAACC CGGATGCCGG TTCGGCGACC GAGGAGCTCG ATGTCGATTA CGAGGCCTCC
GCCCTCGATA TCGGCTTCAA TGCCCGCTAT CTGCTCGACA TCACCGCGCA GCTCCAGGGC
GATACGGCCC TGTTCAAGCT CGCCGATCCG GGCTCGCCGA CGCTGATCCA GGACCGCGAC
GGCGCCCCGG CTCTTTATGT GTTGATGCCG ATGCGCGTGT GA
 
Protein sequence
MRVTVERAAL LKSLGHVHRV VERRNTIPIL SNVLLRTGEN GLQLKATDLD IEVTETVAAD 
VLDAGATTVP AHVIYDIVRK LPEGAQVSLE TSGETGQMTI RSGRSRFALG ALPEGDFPDL
AAGELPHSFA IPAAELKQLI EKTQFAISTE ETRYYLNGIY FHTLEVEGAL KLRAVATDGH
RLARVETEAP EGSRGMPGII VPRKAVAEIQ KLVDDGGESV QVELSPAKIR LTFAGGVILI
SKLIDGTFPD YQRVIPTGND KRLTVERDAF AKAVDRVSTI SSERGRAVKL AVSEGRLALS
VTNPDAGSAT EELDVDYEAS ALDIGFNARY LLDITAQLQG DTALFKLADP GSPTLIQDRD
GAPALYVLMP MRV