Gene PCC7424_5842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5842 
Symbol 
ID7112829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011738 
Strand
Start bp266623 
End bp266898 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content39% 
IMG OID643484121 
ProductCRISPR-associated protein Cas2 
Protein accessionYP_002381130 
Protein GI218442810 
COG category[L] Replication, recombination and repair 
COG ID[COG1343] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGTAT TAGTCGTTTA CGATATCCCA GATAATAAAC GTCGCACTAA ATTGTCTAAG 
TTTCTGGAGG GGTATGGGGA AAGGGTACAG TGGTCTGTTT TTGAATGTTT TCTGTCTTTA
GAGGAGATGA GAGTGCTTTA TCAAAAAGTA AAAAAGCGTG TTGAACCTCT TGAAGATAAT
GTTCGTTTTT ATTGGATTTC TAATGAGGCG GTGTCAAGGG TGTTAACCAT TGGGGGTGAG
TCTCCTTCGC CTCCGCCAAA TTATTATTTG ATCTAG
 
Protein sequence
MLVLVVYDIP DNKRRTKLSK FLEGYGERVQ WSVFECFLSL EEMRVLYQKV KKRVEPLEDN 
VRFYWISNEA VSRVLTIGGE SPSPPPNYYL I