Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_5806 |
Symbol | |
ID | 7112793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011738 |
Strand | + |
Start bp | 233594 |
End bp | 235588 |
Gene Length | 1995 bp |
Protein Length | 664 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 643484088 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_002381097 |
Protein GI | 218442777 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system [COG4252] Predicted transmembrane sensor domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACTA AGAATTTTTT CAAACATTTA CTGATTTTTA TTCCTATAAC TGGTTTCATT TTAGTTTTAA GAACTCTCGG GTGGCTTCAG TTATTTGAAT TACTAGCCTA TGATATCTTA TTTCAGTTAC GTCCTTTAGA ACCTTTGGAT TCTAGGATAG TTATTGTTGG CTTACAAGAA TCAGAAATTC AAAAATACTA TCCTCTAAGC GATCAAACCC TTGCTCAATT AATTGAGAAG ATTAAACGGC AAAACCCGGT AGCGATCGGT TTAGACTTTT ATAGGGACGT ATCAGTTGGA GCCGGACAAG AACAATTGCT TAAAACCTTC AAAACAACGC CTAATTTAAT AGGGGTTAAA AAAGCCATTG GAGAGAAGGT TAATCCTCCA CAAGCGCTAA AAGAACGAGG ACAAATAGCC TCATCGGATG TTGTACTTGA TGGAGATGGT GTTTTACGTC GAGGCTTAAT AGGATTTTTT GATGAGCAAG ATCAATATGT TAACACAATC GGAGCAAAGC TAGGGTTTTT ATATTTAGAA AGAAAAGGAA TATTTCCCGA AACTGATAAA TCTCAAAAAG CCATTAAAGT AGGAGAGAAA ATTTTTGAGC GATTTCAAGC CAATCAGGGG GCTTATCGTC AAGCAGATGC CGGAGGATAT CAAATCCTTT TAAATTCAAG AAATCCTCGT CAAAGTTTTG TAAAAGTTTC TTTTGGTGAC GTTTTATCCG AGCAAATTAA CCCCAGATTA TTCCAGGATA AATTAGTTTT TATTGGTACA ACCTCAAGTT CTATTAAGGA TGAATTTTTA ACTCCTTATA GTCGGTCTTT ATTTACTTCA CCTCAACCGG TTTATGGGGT AGAAATACAA GCTAATCTAG CTAGTTATAT TCTAAGTGCT GTTTTTGATA ATAGAGCTAC GATAAAAACT TTTCCTCCTT TGATTGACTT GATTTTCTTA ATTGGAATTG GAGGAATAGT TTACTTATGT CTTTGGTCAA TCCGCTCAAC CCAAAATTAC TTAGTTTTAA CCCTTAAAGG GATAATTATT ACTATATTTT TAAGTGGATT ACTATTAGTT ATTTATTATT GTTTATTTCT CGGAGGGTGG TGGTTTCCTC TTATTCCTTG TCTTTTAGAA GTGGGAAGTA TAACTTTGGG AGTTGCTGGA CTTATTTTAT ATAATAAAAA TCAAGAAATT CAAAGTTTAT ATAGGGAATT AAAACAAACT CAAGAACAAA TTATTTTTGA AAAAAAGCAA AGCTCTTTAG CGAAATTGGT ATTAGGAGTT GCTCATGAAA TAAACAATCC CCTCAATTTC GTGATCAATT TTTCAGTTTT AAGCCTTGAT TATTTAGAGG AATTGGAAAA TCTTCCTTGG ACTCCTGAAA ATAAAGAAGA GATAAATAGA TTGATTTTAT TTATTAAAGA AAATTGCCAA GATACTTTAG AACACGGACA ACGGGCTGCT CTTATTACTA AATCTCTTTT ACAACAAACC CCTTCTCAAG ATAATAGAAC TATTTCGGCT GATGTTAACG AGTTGATTGA ATCCTTATTA TCTGTTGTTA TCTACAGTAA ACAAGCTGAA AAGAATGATT TCTCTCTCTT TATAGAAACT AATTATGACC CTTTAATTGG GACAAAAGAA ATAATTTATC AAGATGTTTA TCAAATTTTA GTGAACTTAG TCAATAATGC TTGCGATGCA GTATTTGAAA AAAAGAAGAA AGAAGGAGGC GATTTTGACC CCAAAATTTT TGTTTCTACT CGTTTATTAA AAAATGAAAA ATTTCAACTC ACGATAGGAG ATAATGGGGA TGGCATTGCG CCTGAAATAG AAGCCCATCT CTTTGAACCG TTCCAAACTA CAAAAAATTT GGGAGAAGGC ATTGGCATAG GTTTATATAA TACCTATCAA TTAGTCAAAA AAAATCAAGG GAATATCTAT TGGAAAAGAG AAGACGGTAA GACAACATTT TTTGTTGAAA TTTGA
|
Protein sequence | MKTKNFFKHL LIFIPITGFI LVLRTLGWLQ LFELLAYDIL FQLRPLEPLD SRIVIVGLQE SEIQKYYPLS DQTLAQLIEK IKRQNPVAIG LDFYRDVSVG AGQEQLLKTF KTTPNLIGVK KAIGEKVNPP QALKERGQIA SSDVVLDGDG VLRRGLIGFF DEQDQYVNTI GAKLGFLYLE RKGIFPETDK SQKAIKVGEK IFERFQANQG AYRQADAGGY QILLNSRNPR QSFVKVSFGD VLSEQINPRL FQDKLVFIGT TSSSIKDEFL TPYSRSLFTS PQPVYGVEIQ ANLASYILSA VFDNRATIKT FPPLIDLIFL IGIGGIVYLC LWSIRSTQNY LVLTLKGIII TIFLSGLLLV IYYCLFLGGW WFPLIPCLLE VGSITLGVAG LILYNKNQEI QSLYRELKQT QEQIIFEKKQ SSLAKLVLGV AHEINNPLNF VINFSVLSLD YLEELENLPW TPENKEEINR LILFIKENCQ DTLEHGQRAA LITKSLLQQT PSQDNRTISA DVNELIESLL SVVIYSKQAE KNDFSLFIET NYDPLIGTKE IIYQDVYQIL VNLVNNACDA VFEKKKKEGG DFDPKIFVST RLLKNEKFQL TIGDNGDGIA PEIEAHLFEP FQTTKNLGEG IGIGLYNTYQ LVKKNQGNIY WKREDGKTTF FVEI
|
| |