Gene PCC7424_5779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5779 
Symbol 
ID7112766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011738 
Strand
Start bp203349 
End bp204392 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content37% 
IMG OID643484063 
Productglycosyl transferase family 8 
Protein accessionYP_002381072 
Protein GI218442752 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.149079 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGGTT CTGATCAAAA CTTAGAGAAT GAGCCAATAA CTATTGTCAG TGGTGCAGAT 
GACAAGTTTG CTCTAGGACT TGCCGTTACC TTGTACTCTG CTTTAGCTAA TTTAGATACC
AAGAGAAAAA TAGATATCTA CATCGTTGAT GGAGGCATCA ATAGCAAAAA TCGAGATAAA
TTGACCCAAA TTTTGAACAG TGATTTAATG CCTGTGAGTA TAAAGTGGGT TAAACCAGAC
TTAACGGTAT TGGAGGGAGT AAAGCTTTTT GGCTCTCTAA ATGTAACAAC TTATTTTCGA
TTACTACTGC CGGAATTATT GCCGACACAA GTAGAACGGG TTATTTATTT AGATAGCGAT
TTGGTGGTTG AGGGTAATCT AGCAAACCTT TGGGAGCAAG AATTGGGGAA TTGCCCCGCT
GTTGCTGTCC AAGATTACGT TTTTCCCTAT GTCTGTAATG GTCTAAAAAC TTATCAACAA
TTAGGACTCG CATCGAACAC TCCCTACTGT AATGCTGGAG TTATGCTGAT TAATATCAAA
CAATGGCGTA TAGAGGCATT AAACCGAAAG ATTTTAGAAT ATATCCGCAA GTTCTATGAT
TTAGTGTACC TAGCTGATCA AGATGGAATC AATGCACTGA TTGCTAATCG ATTTAAGCTT
CTTGATTTGA AATGGAATGT ACAAATCTTT GGTGTTTATA ATGGTAAAAT TGATTTGCTT
TGTAAGCCAA AAGAACTCAT TCGGGATGCT TTTATTCTAC ATTTTACAAC TCCAATTAAA
CCTTGGCATC CCTATTATAG ACAAGCAGGT GGCTCACGGT TTACTCATTA CCTTAGAAAG
AGCAAATGGT TCAACGATCT AGAATACTTA AAATGGTTTG CTAATGTGAG GCTGCCTCAG
ATAGTTCTCT ACTCAGCAGC ACAGATCAAG AGGGAGTGTT TGAAAAAGAG TATAATGAGC
AGAAGAACTA AAACTAAAAG CATTATTGCT CAAGATAACT CGTCAAAAAA ATATGACACG
GAATCTTCCG CCAATATGGG GTAA
 
Protein sequence
MQGSDQNLEN EPITIVSGAD DKFALGLAVT LYSALANLDT KRKIDIYIVD GGINSKNRDK 
LTQILNSDLM PVSIKWVKPD LTVLEGVKLF GSLNVTTYFR LLLPELLPTQ VERVIYLDSD
LVVEGNLANL WEQELGNCPA VAVQDYVFPY VCNGLKTYQQ LGLASNTPYC NAGVMLINIK
QWRIEALNRK ILEYIRKFYD LVYLADQDGI NALIANRFKL LDLKWNVQIF GVYNGKIDLL
CKPKELIRDA FILHFTTPIK PWHPYYRQAG GSRFTHYLRK SKWFNDLEYL KWFANVRLPQ
IVLYSAAQIK RECLKKSIMS RRTKTKSIIA QDNSSKKYDT ESSANMG