Gene PCC7424_5744 details

Gene Information

• Locus tag: PCC7424_5744
• ID: 7112922
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 7424
• Kingdom: Bacteria
• Replicon accession: NC_011738
• Strand: +
• Start bp: 130772
• End bp: 131465
• Gene Length: 694 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 643484030
• Product: Insertion element protein
• Protein accession: YP_002381039
• Protein GI: 218442719
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1662] Transposase and inactivated derivatives, IS1 family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 41
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCAAATTA GTTGTCCAAA ATGTGCCTCT AATAATATTA GAAAAAACGG TCATAGACGA 
GGGAAACAAA ACCATCAATG TCAAGATTGT GGACGGCAAT TTATTGATTA TTATTCTCAA 
GTAGGTTATC CTAAAGAAGT CAAAGAAAAC TGTTTGACTA TGTATGTAAA TGGCAATGGA 
TTTAGAGCAA TTGAGAGAAT AACGAAGGTC AATCATAACA CTGTAATCCG TTGGGTCAGA 
CAAGTAGGGA TTAAACTATC AAATCAGAAA GAAACTTCTA GTATTCCTGA TGTGGCTCAG 
TTAGACGAAT TACAAACATT TGTTGGTAAA AAAAAATAAA AGATGGATCT GGACATCTGT 
TGATAAGGAT AATCAAGGTA TTTTAGAATA TGTAATTGGA GATAGAAGTT CAGATACCTT 
TGAAGGATTA TGGAACAAAA TCAAACATTG GAATTGTTAT TTTTGGATAA CGGATGGCTA 
TAAAGTTTAT CCAAATTTTA TTCCAGATGG AGACCAAATT ATTAGTAAAA TATATATGAC 
AAGAGTTGAA GGAGAGAACA GTCGATTACG ACATTACTTG GCCAGACTAC ATCGTAAAAC 
TTTTTGTTAT TCAAAGTCAG ATGAAATGTT ATTTTTATCG GTTAAACTAC TTGCTTATTA 
CTTAAAAAAT AAGAATCTGT CTCTAATTAT TTAA 

 

Protein sequence

MQISCPKCAS NNIRKNGHRR GKQNHQCQDC GRQFIDYYSQ VGYPKEVKEN CLTMYVNGNG 
FRAIERITKV NHNTVIRWVR QVGIKLSNQK ETSSIPDVAQ LDELQTFVGK KNKRWIWTSV 
DKDNQGILEY VIGDRSSDTF EGLWNKIKHW NCYFWITDGY KVYPNFIPDG DQIISKIYMT 
RVEGENSRLR HYLARLHRKT FCYSKSDEML FLSVKLLAYY LKNKNLSLII