Gene PCC7424_5682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5682 
Symbol 
ID7113009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011738 
Strand
Start bp64542 
End bp65816 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content36% 
IMG OID643483970 
Productprotein of unknown function DUF201 
Protein accessionYP_002380979 
Protein GI218442659 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTA TTCCAAATTT TTCTTACTTC GAGGGAAACT CTTTCTCGGC ACTATTAGCC 
GCAGATATAG CCGATGGCAA ATATGGATTT CTCCTGAATT ATCCAGCTAC CGCTAGTTGG
GCAGCTTACC CTAATACACA ACAGTATAAA CTCCAAGATG GTAGTAGTCA AGCCACAAAA
ACATCTTTTG ATAAAATTTG TCAGAAAGAA CCTTGGAAGA ATTTAGCCGT CTTAGGCGAA
GCATTACCCG GCATTGTGAT TTCTCCGGTG CCAACAGTGC TGTTGAATTA TTGGAAAGAA
CATTTTGGCT TTAGTTATTC CAACATAGAA CTGATTGACT GCTCGGTGTA TCTTGATGAA
CTTTCTACAA CTAATCACTT TGACAAAATT ATTACATTAT TCCCTTTTGC TCATCTCAAA
ACCGAAAAAC ACGCAGTCAA CCCCAATATT CACTATCGCT TACTCAGCAA AGTAACTCTT
GCAAAAATGG GTGTGCAGTG TCCAAAATAT GAAAGCTATA ATCTACATCA AACGCCTTTA
AAAGACATTC AATTTCCTGT CGAGTTTCCT TACCTGATTA AAACATCTCA CGGACTATCA
GGAGAAGGAA CTTATATTAT TAAAAATACC TTTGATCTCA ACTACTGCCA GTCTGAGCTA
AAAAAATATC TTGACATTGG CTTACTCGAT GAAATTGTTG TTTCAGAATT TATTAAAGAC
CTAGTGCAAA ACTATTGTGT GCAGTTCTAT ATCAACAAAG CAGGAGTAAT TACACTTCTT
GGCACAACAA CACAATTAGT CAGTTTTGAT GGAACTTATT TAGGTGGATT AATTGACTAT
CAAAACAGTG ATATGAGCAA ATTTGGCGAA ATGATCGCTA TTATTGGTCA GTATGCCAAA
GAACAAGGTT ATTTCGGCTT TATTGGCTTT GACGTGCTAG AAGATAAAAA CGGAAAACTT
TATGCAATTG ATGCAAATTT TCGAGTTAAT GGCTCAACTC CCTTATGTTT ACAGCGTCAT
ACTCTGTTAA GCTTGGACAA ACCGGTGGCT AAGTATTCTA CAGACTATCG TCGAGATGGA
ACTCTAGATG AGGCTATGAT AACTTTAAAA GCTTCTCTTG AGCGCAAGGA TTTTATTATT
CTGTCTGCCT TAGAAAGGGT TAAATACGGT AAAATTTACA CAGAAATTTA TGGAATTGTC
GCTGGAAAAA CTATTGATGA ACTAAAATCT ATTGAGCAAG AACTACAGAG TAAAGAATTG
TATAATCTTA GTTAA
 
Protein sequence
MDFIPNFSYF EGNSFSALLA ADIADGKYGF LLNYPATASW AAYPNTQQYK LQDGSSQATK 
TSFDKICQKE PWKNLAVLGE ALPGIVISPV PTVLLNYWKE HFGFSYSNIE LIDCSVYLDE
LSTTNHFDKI ITLFPFAHLK TEKHAVNPNI HYRLLSKVTL AKMGVQCPKY ESYNLHQTPL
KDIQFPVEFP YLIKTSHGLS GEGTYIIKNT FDLNYCQSEL KKYLDIGLLD EIVVSEFIKD
LVQNYCVQFY INKAGVITLL GTTTQLVSFD GTYLGGLIDY QNSDMSKFGE MIAIIGQYAK
EQGYFGFIGF DVLEDKNGKL YAIDANFRVN GSTPLCLQRH TLLSLDKPVA KYSTDYRRDG
TLDEAMITLK ASLERKDFII LSALERVKYG KIYTEIYGIV AGKTIDELKS IEQELQSKEL
YNLS