| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5635 |
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| Symbol | |
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| ID | 7112962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011738 |
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| Strand | - |
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| Start bp | 12920 |
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| End bp | 13846 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643483932 |
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| Product | RNA polymerase, sigma 32 subunit, RpoH |
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| Protein accession | YP_002380941 |
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| Protein GI | 218442621 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000102999 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCTAATC GTCGAATCAA CAACTCTTTT TTAGATAGTT ATTTGAAAAA TTTTACGCGC
TACGAACTTC TTAATTCTTC TCAAGAAATA GACCTGGGGC AGAAAATTCA AAAATGGCAG
AAGTTGAAGC ATCAATTTGT TCAATTTCAG AAAAAGACGG GGAAAAAAAC TAGCGTCTTT
GATTTTTGCT CTGACTTTCA GCTAGAAGAA GCCGAGTTCT ACCTTGTTTA TGAAGAAGGT
CAACAAGCTA AAAATCAATT AGTCCAAGGG AATTTAAGAT TAGTTATTAA CTTGGCTAAA
AAATACCTTG GACGAGGTTT AAGCTTTGAA GATTTGCTCC AAGAGGGGAA TATAGGGTTA
ATACGAGCAG CCGAACTTTT CGAGCCTAGC AAAGGTTATA AATTTTCGAC TTATGCTTAT
TGGTGGATAC GGCAACAGAT CATCAGAGCA ATAAATAATT CCGCTCGAAC AATCCGCTTG
CCAGTACATA TTATCGCTCG CTTAAATCGA ATCAAAAAGA CCCAACATAA ATTAGCGGCT
CAATTAGGGA GAACTCCAAC AGTCCAAGAA ATAGCCACCT CCTTACAAAT GTCAGCCCAA
GAGATTGAGA AATATCGTGA AGTTGCTCAA AAGACAATTT CTTTGTCTAC CATCGTAGAT
GAGCAAGGAC GAGAAACTTT ACAAGATTTA ATTGCCGACC CAAATCCTCA GCCAGATTTT
TTAGAGCGGG TTTTTAGCTA TGAACAAATA TTAGAGAAGA TGGAAACTTT ACCTCCTCGT
TATCAAGATA TCCTTAAAAA AAGGATTTAT GAAGAACAAA CCTTAGAAGC CATTGGAACT
TCGACAAAGC TTTCAAAGGA ACGAGTTCGT CAAATTTTTC AGAAAGCTCT CTCTCGACTT
AGGGAAGAAT TTCTTAAAGA CAATTAA
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| Protein sequence | MSNRRINNSF LDSYLKNFTR YELLNSSQEI DLGQKIQKWQ KLKHQFVQFQ KKTGKKTSVF
DFCSDFQLEE AEFYLVYEEG QQAKNQLVQG NLRLVINLAK KYLGRGLSFE DLLQEGNIGL
IRAAELFEPS KGYKFSTYAY WWIRQQIIRA INNSARTIRL PVHIIARLNR IKKTQHKLAA
QLGRTPTVQE IATSLQMSAQ EIEKYREVAQ KTISLSTIVD EQGRETLQDL IADPNPQPDF
LERVFSYEQI LEKMETLPPR YQDILKKRIY EEQTLEAIGT STKLSKERVR QIFQKALSRL
REEFLKDN
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