Gene PCC7424_5521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5521 
Symbol 
ID7112736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011737 
Strand- 
Start bp175560 
End bp176222 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content39% 
IMG OID643483899 
ProductCRISPR-associated protein DevS 
Protein accessionYP_002380908 
Protein GI218442587 
COG category 
COG ID 
TIGRFAM ID[TIGR02586] CRISPR-associated protein DevS
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.397146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGCTC TATATGTTGA TGTTCCCTAT GCTAGTTTTC GTAAGTCTTA TGCGCGTTCT 
TTAGCAGAAA CTTATCCTTT CCCTCCTCCT GCTACTGTTT ACGGAATGTT ACTTTCATTG 
GTTGGAGAAT GGTTTCGTTC TCGACACACA GGAGTAGAAC TTGCCTTTGC TTACAAAAAA 
AGGCCCAAAG TTGCAACAAC TCTGCGAAAG TTAAGCCGTT ACAAATATGG TGTGTCTAGT 
AAGCAGAAAA CTCACGGAAA CGCTCCTGAT TTCATTGAAA CATTATGCGA TATTGAATTT 
ATTTGTTGGA TAAATAGCTC GAATGAATTG CAAAACCCAA CCTTAGAAAC TCGCATAATA 
AATGCGCTAG AATATCCTGA AAGGATCAAC CGTAAAGGAG TTGTTGCTTT AGGTTTAAAC 
GATGATGCTG TCAATGACAT CGCGTTATTA AAATTCAACC AGTTTCAAGA ATCTGAGCAT 
TGTCAAAATA CATGGTACTG GTTAATTCCT TGTGACAATG GCAATATAGA ATTACCACTT 
TGGGTCGATC ATATTGGTTC TATTGATACT CGTTGGCAAC GGTATCGCTT TGATAGCAAC 
CCCTCACTGG TAACTTCAGA GCCTTCGTTT GAAAAATTTG TTCCAATACT TGATCCTCGG 
TAA
 
Protein sequence
MIALYVDVPY ASFRKSYARS LAETYPFPPP ATVYGMLLSL VGEWFRSRHT GVELAFAYKK 
RPKVATTLRK LSRYKYGVSS KQKTHGNAPD FIETLCDIEF ICWINSSNEL QNPTLETRII 
NALEYPERIN RKGVVALGLN DDAVNDIALL KFNQFQESEH CQNTWYWLIP CDNGNIELPL 
WVDHIGSIDT RWQRYRFDSN PSLVTSEPSF EKFVPILDPR