Gene PCC7424_5520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5520 
Symbol 
ID7112735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011737 
Strand- 
Start bp174746 
End bp175387 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content37% 
IMG OID643483898 
Productprotein of unknown function DUF820 
Protein accessionYP_002380907 
Protein GI218442586 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.387826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTATT CAACTTTGAT AGTCACAAAT ACCTGGATTC CTGCTGAGTG GGAAGCTTTC 
TGTTCTATAA TTGAAGACCC TGTCTATGAA AAAGCTAAAG CCTATTATTA TCATCATCAC 
ATGAGGCTGG AAATGTCACC GGTTGGATTT GATCACAGTA CAAATCACAG CATCATTATT 
GTGGCGATTA ATCTCTTCTG TATTCTCAAT AATATTCCTT TTCAATTAGC GGATAACTGC 
TCATATCGTC AGACAGGAAT CAAGGAATGC CAACCCGATA TTTCTGTTTA TGTGGCAGAA 
CAGGCTAATA TTATTCCTCA AGGAACAAAT ATCGTTAATA TAGATCAATA TCCGCCTCCT 
GACTTAGTTG TTGAAGTGGC TAAAACCAGT TTACTCGATG ATTTAGGGAC AAAGCGATCG 
CTCTATGAAA CATTAGGAGT AAAAGAGTAT TGGATTGTTG ATGTAGACAA TACGGCAATT 
ATAGCTTATA AGATGGAAAA TAAAGGCTCT TACCAAATAC AATGTTCTCA AGTTTTCTTA 
GGCTTAGATA TATCTATCTT AGAAGAAGCT TTACGTCAAA GCCGTCAAAG TGATCAATCT 
GCTGTTGGAA GATGGTTAAT GACCCAATTT CAACCATCCT GA
 
Protein sequence
MSYSTLIVTN TWIPAEWEAF CSIIEDPVYE KAKAYYYHHH MRLEMSPVGF DHSTNHSIII 
VAINLFCILN NIPFQLADNC SYRQTGIKEC QPDISVYVAE QANIIPQGTN IVNIDQYPPP 
DLVVEVAKTS LLDDLGTKRS LYETLGVKEY WIVDVDNTAI IAYKMENKGS YQIQCSQVFL 
GLDISILEEA LRQSRQSDQS AVGRWLMTQF QPS