| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5519 |
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| Symbol | |
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| ID | 7112734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011737 |
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| Strand | - |
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| Start bp | 172956 |
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| End bp | 174632 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643483897 |
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| Product | CRISPR-associated protein Cas1 |
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| Protein accession | YP_002380906 |
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| Protein GI | 218442585 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1468] RecB family exonuclease
[COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR00372] CRISPR-associated protein Cas4 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.28105 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACTA CTGATCTAGA CCTAGAAACT TTGGCAGAAC CGATGGGGGA TACCATGAGG
GTTTCGGCTC TCCATGCCTT TGCTTACTGC CCTCGTCTTT TTTACCTTGA GGAAGTAGAG
GAACTCTATA CTCAAGATGC GGCGGTCTTT GCCGGTCGCC GGCTTCATGA AGAGATCGAT
AAAAAAGAAG ATGAGGAATG GGAGGATCTC TACCTCGAAG ATGAGCATTT GGGCTTAAGG
GGACGGGTGG ACGCTTTGCG GACTCGTGAC GGCCAAACCA TCCCCTACGA GCATAAACGG
GGGCGCTGCT ACCGAGATGA AAAGAAGCAG CCTCAAGCTT GGGACAGCGA TCGCCTTCAA
ATTTTAGCTT ATTGTTGTCT TATTGAGGCA GCATTAGGAA TTACTGTCCC AGAGGGAAGA
ATTCGCTATC ATGCGGATAA CGTGCTAGTT CATGTCCCCT TCGATGAGAC AGGAAGACAA
TGGGTAAAAG ACTCTATCCG GCAAGCACGA GAGTTAAGAA AATCCCCTTA TCGTCCTGCG
GTGATTGACA ATGAACACTT GTGTTCTCGT TGTTCTTTGT CTCCTGTCTG TTTACCGGAA
GAGGCTCGGT TAGCTCATAA TAAAGAGTGG CATCCCGTCC GGTTATTTCC TGTTGATGAT
GAACGAGAAG TCATTCACGT TCTCGAACCC GGAACGAGAG TAGGACGCAC TGGGGAACAA
CTGAAAATAA GTCGCCCTAA TCAACCCGAT GAGAAAATAG CGATTGGGCA AGTCTCTCAG
GTGGTTCTCC ATAGTTTTTC CCAGATTTCT ACTCAAGCCG TTCATTTCCT GGCTTATAAA
GAAGTTGGGA TTCACTTTGT TTCTGGGGGA GGGCGCTATA TAGGAAGTAT TGATGCTCGC
TCCCGGAGTA TTCAACGGCG TGTCCGCCAG TATCAAGCGT TAAGTCAACC GGATTTTTGT
CTAGAACTAG CCCGAAAGTT GGTTGCTTGT AGGGGAGAGG GGCAGCGTAA GTTTTTAATG
CGGGGAAAAC GTAATAAAAA AGGTGATTCT CTTGCATTAG AGAAAACGAT CGCCCAAATG
AAAGCGGTAC TCAAGCAAGT ACCACAAATT CAGTCCCTTG ATTCATTATT GGGAATTGAG
GGCAATTTAG CTGCTCTTTA TTTTGGAGCT TTATCTAACC TATTGGCTGA AAATGCTCCA
GAATCACTCT TATTTTCGGG TCGTAATCGT CGCCCTCCTA AAGATCGCTT TAATGCACTG
TTGAGCTTTG GTTATTCTCT GCTCATCAAA GATGTAATGA ATGCTATTCT TGCTGTTGGG
TTAGAGCCAG CATTAGGATT CTATCATCAG CCGAGAACCC AAGCTCCTCC TCTGGCCTTG
GACTTAATGG AAATTTTCCG CGTTCCTTTG GTAGATATGC CCGTTGTCAC TTCTATCAAC
CGAAGTCAGT GGGATATACA AGCGGACTTT GATGTACGGG GGCAGCAAGT TTGGCTTAGT
GACAGTGGGC GACGCAAATT CATCAATCTT TACGAGCAAC GTAAAGCAGA AACCTGGAAA
CACCCAGTTA CGGGCTATTC CTTGACCTAT CGCCGTTTAT TGGAGCTAGA AGTCCGATTA
CTGGAAAAAG AATGGTCAGG AGAAGGCGGA TTATTTGGTC AGTTGATTGT ACGGTGA
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| Protein sequence | MQTTDLDLET LAEPMGDTMR VSALHAFAYC PRLFYLEEVE ELYTQDAAVF AGRRLHEEID
KKEDEEWEDL YLEDEHLGLR GRVDALRTRD GQTIPYEHKR GRCYRDEKKQ PQAWDSDRLQ
ILAYCCLIEA ALGITVPEGR IRYHADNVLV HVPFDETGRQ WVKDSIRQAR ELRKSPYRPA
VIDNEHLCSR CSLSPVCLPE EARLAHNKEW HPVRLFPVDD EREVIHVLEP GTRVGRTGEQ
LKISRPNQPD EKIAIGQVSQ VVLHSFSQIS TQAVHFLAYK EVGIHFVSGG GRYIGSIDAR
SRSIQRRVRQ YQALSQPDFC LELARKLVAC RGEGQRKFLM RGKRNKKGDS LALEKTIAQM
KAVLKQVPQI QSLDSLLGIE GNLAALYFGA LSNLLAENAP ESLLFSGRNR RPPKDRFNAL
LSFGYSLLIK DVMNAILAVG LEPALGFYHQ PRTQAPPLAL DLMEIFRVPL VDMPVVTSIN
RSQWDIQADF DVRGQQVWLS DSGRRKFINL YEQRKAETWK HPVTGYSLTY RRLLELEVRL
LEKEWSGEGG LFGQLIVR
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