Gene PCC7424_5483 details

Gene Information

• Locus tag: PCC7424_5483
• ID: 7112698
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 7424
• Kingdom: Bacteria
• Replicon accession: NC_011737
• Strand: +
• Start bp: 139423
• End bp: 141513
• Gene Length: 2091 bp
• Protein Length: 696 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 643483864
• Product: CHASE2 domain protein
• Protein accession: YP_002380873
• Protein GI: 218442552
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG4252] Predicted transmembrane sensor domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 23
• Fosmid unclonability p-value: 0.0712134
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATTAACC CAATGTTTTT TAGGAATATT AAGCAAAAAA TTGAGGAAAA TCGTGAGAAG 
ATTATCTTTA ACTTGATAAA AGTTGCTTTA GGTTTATCGA TAATTTGGGG AATAGGAGAA 
ATTAGAAATC GGGGCAGCCT TCAATGGTTT GAGTGGGTAA ATCTTGATAT ATTTTTCCAA 
TTGCGACCTT CTGAGCCGAT AGATAATCGA ATTATTTTGG TTGGACAAAC TGAAGATGAC 
ATAAAAAATA TGAAGTCGGC TTATCTTAGC GATCGTCAAG TTGCTCAATT GATTAAAATT 
ATCAAGGAAG GTAAACCTGT TGCCATTGGT CTTGATTTTT TGCGCGATCA ACCTATAGGA 
GAAGGGCGTG AAGAATTATT AGCTATTTTC AATAACACTC CTACACTCTA TGGGGTTGGC 
AAGCAGGCTG GAATCGAAGG AGATCCGGAT TTTGCGCCAA TAGCTCCACC ACCTATTAAA 
TTTGAGCAAA TTACGGAAGC GTCGGCTCTA GAAGATGGAG ATAGTGTTGT AAGAAGGCAA 
CTTCTGTATC CGAAAACAAC GCCTCCTGCC ATTCCTAATT TAGGATTAGC GTTAGCTTTT 
ACATACCTTG AAAAGCAAAA AGGAATAAAA CCCGAAGCGG GAGAAAAAAA AGCTTTAAAA 
TTAGGGAAAG CTACATTTTT TCTTTTTTCT AACCCTTCCG GCCCTTATAC TCAGGCTGAT 
GATGGTGGTT ACCAAATATT TTTCAATTGG CGGAAAATTA AATTTCATGT AGTTTCAGTA 
AGTGATGTTT TGGCGCAAAA AAATATATCG GGTTTATTTG ATAATCGTAT AGTAATAATT 
GGCTCTTATG CCGCCAGCAA AAAAGATCAG TTTTTAACTC CTTTTAGTCG AACTTTAAGT 
GATAGTCCCC GCGAAATGTT CGGGATGGAG ATTCAGGCTC AATTGGCTTC AGCTATTATC 
AGTCAAGTTT TAGATGAGCG CCCTGTTACC TTAGCTTTTT GGACTGAGCC TTGGATTTCT 
GCTTGGTTGA TCGGATGGGG GATAGTTATT TGTTTTATTC TTACTTTTTT CAGTCGCAAC 
TGGATACAGA TAGCGATTTT TTTGTTAGGC AGTTCTGTTC TTTTAATTAT CCTAAGTTAT 
TTTTTGTTTT TAGAAGCTAT TTGGTTTCCC TTGATTCCCT CTTTAATGAT TTTGTGGAGT 
CTGGGGATTG TCTTGGCTGG ATTAGATTAT GAATTTAAAA AAATACTTGA TAATAGGAAA 
ATTAGACAAC TTAATGAAAA TTTAATCGAG CTTAATCAAC AATTAAAAGA CAAGTTAGAT 
CGAAGACAAG CTTATAAAGA ATTTACTGTT TTAGGAAATC AATTTAGTAA AAATCTTAAT 
AAAGAATTAC AAAATTTATT TGATTTAAAA TTTATATTAT TAGAAAAAAA GACAAATTTT 
AAACAAATAC TTCAAAAAAA TATTAACGAT TCCAAAAATT TTTTAGAGCT TAATAATACT 
TGGCTTGAAA CGGAGATCGC TACTGATAAA GTTTTTGATT CTTTTGAGGC TATTTGTTTG 
AAATTAATAA ATCATTTTCC TCGGTTAGAA AATTTATTTT CTAATTATGA TTGGCTTTCT 
GATGAAAATT GGGAGTATTT GACGATAGAA GAAACCATAA AACTTGCGAT AAAATGGTTT 
CATCCTATAT ATTTTCATGA ATATAATGTT GAACTTGATA AAATAATAAA ATTAGATTTT 
CAGTCCGAAT ACTCGAATTT ACAAAAAGTA AATTCTACTC GATTTATAAT CGTTTTTAAC 
CGTATAATTG ATACAATTTT TCTTAAAGTA CAGACGGGAG AAATTTCTTA TCCTAAAAAT 
CAAGCTGAAA AAATTTCTTA TCCCACTATT ACAATTAAAA CCGTTTATAA AAATAAACTA 
AAACTAATTT TTACCGTTCA ATATTTAATA GAAACAACTT TCTATAATAT TTTCTTTTGC 
CAAGAACTTC TTGACTACTA TAAAGCCAAA CTTACAATAA AACAAGATAA GGAAAAAGGA 
CTGACTAACT GGATAATAGA CTGGAATGAT TGGCAATCTC GTGATCAATA G 

 

Protein sequence

MINPMFFRNI KQKIEENREK IIFNLIKVAL GLSIIWGIGE IRNRGSLQWF EWVNLDIFFQ 
LRPSEPIDNR IILVGQTEDD IKNMKSAYLS DRQVAQLIKI IKEGKPVAIG LDFLRDQPIG 
EGREELLAIF NNTPTLYGVG KQAGIEGDPD FAPIAPPPIK FEQITEASAL EDGDSVVRRQ 
LLYPKTTPPA IPNLGLALAF TYLEKQKGIK PEAGEKKALK LGKATFFLFS NPSGPYTQAD 
DGGYQIFFNW RKIKFHVVSV SDVLAQKNIS GLFDNRIVII GSYAASKKDQ FLTPFSRTLS 
DSPREMFGME IQAQLASAII SQVLDERPVT LAFWTEPWIS AWLIGWGIVI CFILTFFSRN 
WIQIAIFLLG SSVLLIILSY FLFLEAIWFP LIPSLMILWS LGIVLAGLDY EFKKILDNRK 
IRQLNENLIE LNQQLKDKLD RRQAYKEFTV LGNQFSKNLN KELQNLFDLK FILLEKKTNF 
KQILQKNIND SKNFLELNNT WLETEIATDK VFDSFEAICL KLINHFPRLE NLFSNYDWLS 
DENWEYLTIE ETIKLAIKWF HPIYFHEYNV ELDKIIKLDF QSEYSNLQKV NSTRFIIVFN 
RIIDTIFLKV QTGEISYPKN QAEKISYPTI TIKTVYKNKL KLIFTVQYLI ETTFYNIFFC 
QELLDYYKAK LTIKQDKEKG LTNWIIDWND WQSRDQ