| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5479 |
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| Symbol | |
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| ID | 7112694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011737 |
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| Strand | - |
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| Start bp | 133547 |
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| End bp | 135997 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643483860 |
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| Product | filamentous hemagglutinin family outer membrane protein |
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| Protein accession | YP_002380869 |
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| Protein GI | 218442548 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0468163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAT TGTCAAATTT GCCAATTACC AAATGTATTA ATGTTTTAAT TGGGCTTTTT
AGCTTTTTAT TAGATCCAGT GCCTACCCAC GCTCAAATAA CTCCAGATCA AACACTGCCA
AATAACTCAA TAATTAAAAT TAATGGCAAT ATGACTGAGA TTATTGGAGG GACAGAAAAA
GGAGCTAATT TATTCCATAG TTTTCGAGAA TTTAGCCTAC AAAATGGAAA TGCAGCCTAT
TTTAACAATG CTTTAAACAT CCAAAATATT TTGGGACGAG TAACCGGTAT ATCTCCCTCA
GTAATTGACG GTTTAATCAA AGCTAATGGA AATGCCAACT TGTTTTTAAT TAATCCTAAT
GGAATTATTT TTGGCTCTAA TGCTCAGTTG GATGTTGGAG GCTCTTTTGT TGGAACTACT
GCTAATAAAA TTCATTTTGC TGACGGAACC CTATTAGAAG TTTCTTCAGA AAAACCTATG
CTAACTGTCG CCATTCCTGT AGGTCTAGAA TTCAAGGATG CCAAGCCCAT AGAATTTAAT
AATAGCGGAC ACAATTTAAT CATAGGATCT TCACCGACTT CGGGTTTTCC AACAACTGGG
TTGCAATCTT ACAATGGGCA GACTATAGCC ATTGTGGGAG GGGACGTAAT TTTTAATGGA
GGAATTATTT CAACAGATGG GCGGATTGAA GTAGGAGCCG TAGATTCAGG GGTTATCGGT
TTAAATCTTT CAGATCAATT AAGTCTAGAT TATGGAGGAT TAAATAGCTT TAAAAACATT
CAACTAGACA ACAGATCTTT ACTAAATGTT TATGGGCTTA CTCCCGGTAG TATTCAAATT
CGAGGCAAAG AAATAAGTTT TACCAATGGT TCTTTAGCTT CCATTCAAAA TTTAGGAACT
AACTCCAATA GTCAAATTAA CGTTCAAGCG ACTCGTTCTT TATCCGTTGA TGGTGTTAGT
AAAATAGAAA ATAGACGAGG TGCTTTTAGT GGTTTGAACA CAGAAGCATT AAGTAGCGGA
AACGGAGCCG ATGTAGAAAT AATAACGCCA ACTTTTACAG CAACTAACGG TGCAGGAATA
TCTACAGCAT CTTTTAATTT AGGTAGAGGT GGTAATATTA ATCTTTCAGT TGCTCAGTTA
TACGTTAGAG ATGGCTCCGG AATAGCTGCC TCGGCTTTTG CCTTTGGTGA TACCGGCGGG
GTTAGATTAC AAGCTACTGA TAGTATCGAA ATTTCTGGGT TTTCCTTAGA TCCGGCAACG
GCATCGGTTG TGTTTCCTGG TTTTGTCGAT TTTCCGACAA CTGTAGGAAG CTTCTCTTTT
TTTGGCAATG CTGGAAATAT TGAAATTGAC ACTCCTCGTT TGCGCGTTAA CGAGGGTGCA
GCACTAGGAA CAGCCGCTTT TTCTGGAGGT AAAGGAGGCG AAGTTATTGT TAATAGTAAT
TCTGTAGAGA TTATCGGAAC AACTCCCTCG CTTAACAGAA GTACAATAAA TAGCGCTACT
TATGGTAGTG GAAATGCCGG AAATATTACT ATTAATGCTT CAGAAATTAA GTTATTTGAC
GGAGGAAGGA TTTTTACTTC CACTTTTTCT AGTGGTAATG CCGGAAAAAT TACCCTTAAT
GCTAATTCGG CGGTTGATGT CATCGGATTT TCTTCTGCTA ATAGAAGCGT TAACAGCAGT
ATCGATTCGG CTACTTTAAT TCCATCGGGT GAAATACGCG AAGCCTTTTT TTTACCCGAC
GTACTTCCTA CGGGTCAATC GGGTGATATT TTAATTAATA CTAGAAAGCT AACCATCGCA
GATCACGGAG GTATTAATGT CAACAATGAA GGGATTTTAA ATAATGCTGG AAACATACAA
ATTAATGCGC CGGCTGTTGT TTTAAATCAA GGCACAATTA CGGCAAATAC CCGCTCTGGG
AATGGTGGCA ATATCACTAT TACCTCACAA AATACAAGGC TCTTTAACGG CGAGATTTCT
GTTTCCGCAC AGGGAGAGGG TAACGGGGGA AACATCATAA TCAACACAGA GTCCTTGACT
TTAGCTAATA ATAGCCAGAT TAGAGCCAAT GCCATTGAAG GTTCTGGTGG CAACATTAAC
ATTACAGCCC AAGCCTTTTT AGAATCTCCA GATAGCTCAA TTACAGCCAG TTCCCAGTTT
GGCACTCAAG GTGTGGTTCA ATTAAATATT AATCCTTTTC AGATTCTTGC CGCCGAAGGG
CTGCCGACGA ATGCGCCAAA TTTAAAAGAA TTATTAGCCC AAACTTGTGA CGCTTTAGCA
AAGCGACAAG ATCGTTTTAC TTCTGTTGGC CCTGGAGGAA TTCCCAATTC ATCCATCGCG
CCTTATACTT TAGAGGATAT AGTACCATCA GGACAAGTTT TTGGCGTTTT GAAACAACCG
GACGGGAAAA TCAAGCTATT AAGCTGCGAC CGCCTAGATG TTCTCGATTG A
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| Protein sequence | MTKLSNLPIT KCINVLIGLF SFLLDPVPTH AQITPDQTLP NNSIIKINGN MTEIIGGTEK
GANLFHSFRE FSLQNGNAAY FNNALNIQNI LGRVTGISPS VIDGLIKANG NANLFLINPN
GIIFGSNAQL DVGGSFVGTT ANKIHFADGT LLEVSSEKPM LTVAIPVGLE FKDAKPIEFN
NSGHNLIIGS SPTSGFPTTG LQSYNGQTIA IVGGDVIFNG GIISTDGRIE VGAVDSGVIG
LNLSDQLSLD YGGLNSFKNI QLDNRSLLNV YGLTPGSIQI RGKEISFTNG SLASIQNLGT
NSNSQINVQA TRSLSVDGVS KIENRRGAFS GLNTEALSSG NGADVEIITP TFTATNGAGI
STASFNLGRG GNINLSVAQL YVRDGSGIAA SAFAFGDTGG VRLQATDSIE ISGFSLDPAT
ASVVFPGFVD FPTTVGSFSF FGNAGNIEID TPRLRVNEGA ALGTAAFSGG KGGEVIVNSN
SVEIIGTTPS LNRSTINSAT YGSGNAGNIT INASEIKLFD GGRIFTSTFS SGNAGKITLN
ANSAVDVIGF SSANRSVNSS IDSATLIPSG EIREAFFLPD VLPTGQSGDI LINTRKLTIA
DHGGINVNNE GILNNAGNIQ INAPAVVLNQ GTITANTRSG NGGNITITSQ NTRLFNGEIS
VSAQGEGNGG NIIINTESLT LANNSQIRAN AIEGSGGNIN ITAQAFLESP DSSITASSQF
GTQGVVQLNI NPFQILAAEG LPTNAPNLKE LLAQTCDALA KRQDRFTSVG PGGIPNSSIA
PYTLEDIVPS GQVFGVLKQP DGKIKLLSCD RLDVLD
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