Gene PCC7424_5405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5405 
Symbol 
ID7112584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011737 
Strand
Start bp49276 
End bp52497 
Gene Length3222 bp 
Protein Length1073 aa 
Translation table11 
GC content40% 
IMG OID643483793 
Producthypothetical protein 
Protein accessionYP_002380802 
Protein GI218442481 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTA TGCCTAATAA CTTTTCCCAA CAATTTATTC TCAAGCTAGA AGGAGACTTT 
AAAAATGGAT TTAACGCCAC CCTAGAAATT GGCGAACAAA ATCAACCTCC TTTGATAGAA
ACGTTGGCAG AACTACCGAG TCATACTCAA CTGTGGGAAT TGTATCAAAA TTGGCAAAAT
AATTACTCTA ATGCAGGACG AGTGACGATC TTATCTTCTA ATGCTGAACG AGAATCCTCT
CAAAATTGTT TAATTCAAGC TAAAGCACTT AAACAGGAAC TAAATCAATG GTTTAAATCA
ACTTCTTTTT TTCCTATTCG AGAGAAATGG TTACAATATG TGACCACCTC TAAAATAACT
CGTATTTTAC TACGTCTGCG TTCTTCGAGT GAAGAAAAAT TAATCAATTT ACGACGAATT
CCTTGGCATT TATGGGAGCT AATTGAAAAC TATAATCTCG AACTTATCCT CAGCAATAGC
ACCTCAGAAA CCGACAAAAA AAATAAATTT CCTACCGAAA AAGGCAAAGT TAGAATTTTA
GCGATTTTAG GAAATAGTCA AGGCATTGAC ATAGAAAAAG ATTTGTCACA GATTAGGCAA
TTACCAAGAG CAGAAATTGA AGAATTAATC GAACCCCAAC GCCATCAAAT TAGCGATCGC
CTCTGGGAAC AACCTTGGGA TATTTTATTT TTTGCAGGTC ATAGTCATAC CGAAAATGAT
AGCGGCAAAT TATTTATTAA TGCTACCGAT TACTTATCCC TAGAAGACCT TAACTATGGC
TTGCGAAAAG CGATTGATCA AGGGTTACAA TTGGCAATTT TTAACTCTTG CGATGGTTTA
GGACTGGCTC ACCAACTAGA AGCTTTACAA ATTCCTCACG TTATCGTCAT GCGGGAACCT
GTTCCTGACA TTGTGGCTCA AGAATTTTTA AAATATTTCC TCAATGCCTT TGCTGGTGGT
CAATCCTTGT CTCTAGCTGT ACGAGAAGCC AGACAGCGAC TCCAAGGACT TGAAGACAAC
TTTCCTTGTG CCAGTTGGTT GCCTGTTCTT TGCCAGCATA TTAATACTAT TACCCCACAA
TGGGAAGATT TGGGCTATCG ACCAACAACC AAAATTCCTT ATCGGGGTTT ATCAGCATTT
CGGACAGAAG ATGCCGCTTT TTTTAAAGGA CGGGAAACCT TCACCCATCA ACTGTTAACC
GCAATTGAGA CGAATTCTCT CATTACTATT ATTGGCCCCT CTGGTAGTGG GAAATCTTCT
GTCGTCCTTG CCGGATTAAT TCCCCAGTTA CCCAGTTCTT GGCAAATTAT CACCCTACGT
CCAAGTGATC GCCCTTGTTA CAATCTCGCT TTAGCCCTCA TTGATCGCCT CAATCCCCAT
TTTACCAACC CGACTGAACG ATTACGACAA ATCCGCCAAT TGGCTACAGA TTTACGACAG
GAAAAGGAGG CACTGCGGGA TGTTATTGAA GCGCTCATTG CTCCTGTTGC TAATACTCGA
ATGCTTTTGA TGGTAGATCA AGCGGAGGAA TTGTATAGCG TTTGTCGAAA TGAACAAGAG
CGTCAGAGCT TTTGGGAAAG ATTACTAGAG GCAGTGGCAA TAAACAATAA CTATCAACCT
TATTTTGTCA TTGTTTTAAC CCTCAGAGCC GATTTCTATG AATCAATTCT GGGAGATCCC
ACTTGTTCCC ATCGCCTTCT TGACAGTCTT TATCCCTTAC GTCCCATGAC TCCTGATGAA
TTGGCATCTG CGATTATTGA GCCGGCTGCC CTTTTTGGCG TTACCTTAGA AGAAGGATTA
ACGCAACGCA TTCTGAAAGA TATTGGGACT GAACCGGGAC AGTTACCCCT ATTAGAATTT
GCCCTAACAC AACTATGGCA AAAACAGGAA GATACTCGAT TAAAGAACGG GATTTATGAT
GACATAGGGG GAGTTCAAGG CGCACTCGCT CAATATGCGG AAACGGTTTA TCACCGACTC
AATGAAGAGG AGAAAAAACG CATCCGGCGC ATTTTTATTC AATTGGTCAA TCCAGGAGAA
AAAAAGCGAG ATACCCGCCG TTTAGCAACC CGTCAAGAAG TAGGAGAGGA AAATTGGGAA
TTAATTACTC AATTAGCTAA TGCGCGTCTA TGGATAACTG ACAGTCAATT AGTCCTCAAT
GATAAAAATG AATTAAAAGA AACAGAAACT GTCGAAATTG TCCACGAAGC TTTGTTAACA
GGTTGGTTTC GCTTAGAAAA TTGGCTCGCA CAAGACCGAG AATTTCGTCT TTGGCAGGAA
CGATTGCGAT CGCATATTCG ACAGTGGCAT AGTAATTATC AAGATAATAG CGCATTATTA
AGAGGAAATC TCCTTAAAGA AGCAGAGGGT TGGTTAGAGC AGAAACCAGT TGAATTTAGC
CTTGAGGAAC GGATTTTTAT CCAGAAAAGT CAACAAGAGC GATCGCAACA GCGACGCAAT
CGCCTCATGG GTTTTGTAGC CAGTTTTGCT ATCATTGCAG CAGGAAGCGC ACTAATTTAT
CAACTTCAAC AAAAGTGGTC ATTACAGCTT GTGCGAAATG TCGCATCAGG CACTGAATCA
CCGACAAGAG AATTAAGCAA AATTTTAGGT AAATTTCAGA GAGAAACTGA TAAAATACGC
CTATCAGGAA GTTTTGATCG AGCAATTGAA GATTATGCCT ATTTAATGAC TGCAAGTCAA
AAATTATTAC AGGAAATTCC TGACTTACCT GATTCTGCCT CCATTAAAGA GATTTCTCAA
GCGGCAGAAA ATTCTCTGGC TCAGACCATT CAAGAACATC GATTACCTCA ATTAGAATCG
GAATTAAAAC AGGGTAATTT TGGGGAATTT AATGGCAATG ATTGGTCGAG ATTTGAAGAA
GTTGCTACAG GAGCATTAAA AATTACTTAT GCTATTTTGA TGAGTCGTCA AGGAGCCAAT
GCGGATCAAG ATCGTAACGG ATATTTAACC CCTGGTGAAG AAATGCGATT ACCTTGTAAA
ACCTTAAAAG ATATTGAGGA ACTTTGGAAA AAGTTTACTA ACAATCGTTG TGGGTTTCGG
GGAAAAGATG ATAATTATGA TGCCCCTAAT TGTCAAGAAT TAGCTCAATA CACTCTCACC
GTCAAATTAT CATTTACTCC CTATAGGTAT TTGTTAGAAG AAAGATTACA ACAATGTCAA
ATTCTTCCTA TTGAATCAGA AAGCTCAACC CGTGAACCAT GA
 
Protein sequence
MTIMPNNFSQ QFILKLEGDF KNGFNATLEI GEQNQPPLIE TLAELPSHTQ LWELYQNWQN 
NYSNAGRVTI LSSNAERESS QNCLIQAKAL KQELNQWFKS TSFFPIREKW LQYVTTSKIT
RILLRLRSSS EEKLINLRRI PWHLWELIEN YNLELILSNS TSETDKKNKF PTEKGKVRIL
AILGNSQGID IEKDLSQIRQ LPRAEIEELI EPQRHQISDR LWEQPWDILF FAGHSHTEND
SGKLFINATD YLSLEDLNYG LRKAIDQGLQ LAIFNSCDGL GLAHQLEALQ IPHVIVMREP
VPDIVAQEFL KYFLNAFAGG QSLSLAVREA RQRLQGLEDN FPCASWLPVL CQHINTITPQ
WEDLGYRPTT KIPYRGLSAF RTEDAAFFKG RETFTHQLLT AIETNSLITI IGPSGSGKSS
VVLAGLIPQL PSSWQIITLR PSDRPCYNLA LALIDRLNPH FTNPTERLRQ IRQLATDLRQ
EKEALRDVIE ALIAPVANTR MLLMVDQAEE LYSVCRNEQE RQSFWERLLE AVAINNNYQP
YFVIVLTLRA DFYESILGDP TCSHRLLDSL YPLRPMTPDE LASAIIEPAA LFGVTLEEGL
TQRILKDIGT EPGQLPLLEF ALTQLWQKQE DTRLKNGIYD DIGGVQGALA QYAETVYHRL
NEEEKKRIRR IFIQLVNPGE KKRDTRRLAT RQEVGEENWE LITQLANARL WITDSQLVLN
DKNELKETET VEIVHEALLT GWFRLENWLA QDREFRLWQE RLRSHIRQWH SNYQDNSALL
RGNLLKEAEG WLEQKPVEFS LEERIFIQKS QQERSQQRRN RLMGFVASFA IIAAGSALIY
QLQQKWSLQL VRNVASGTES PTRELSKILG KFQRETDKIR LSGSFDRAIE DYAYLMTASQ
KLLQEIPDLP DSASIKEISQ AAENSLAQTI QEHRLPQLES ELKQGNFGEF NGNDWSRFEE
VATGALKITY AILMSRQGAN ADQDRNGYLT PGEEMRLPCK TLKDIEELWK KFTNNRCGFR
GKDDNYDAPN CQELAQYTLT VKLSFTPYRY LLEERLQQCQ ILPIESESST REP