Gene PCC7424_5576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5576 
Symbol 
ID7112432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011732 
Strand
Start bp2656 
End bp3372 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content38% 
IMG OID643483624 
Productpolysaccharide deacetylase 
Protein accessionYP_002380633 
Protein GI218442307 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAC TAGAATTGAC ATTATACTTG TCTGGACTAG GGATAGGCAT ACTTCTATTC 
TTTCAGCCCC GTTGGTTACT TTCCATTGCC TTATTAACTA CACCTGGAGT TGTATATTTT
GTTGAAACCA ATGAACCTGT AGTTGCTCTC ACGCTCGATG ATGGGCCTGA CTCCACCACA
ACACCTAAAA TTTTAAATCT TCTTTTAGAC TACAAAGTCC ACGCTACTTT TTTTCTTATT
AGTACCAGAA TTTTCGGTAA CGAAACTATA GTTACCGAGA TTGTGAGACA AGGACATGAA
TTAGGAAATC ATCTTACTGA TGACAAACCA AGCATCAGAA TGTCTACGCT TGAGTTTGAA
GCAAAGCTGC TCGAAGCTCA AAAAATTCTT GGCAAATTTG CTGAAACTCA TTGGCTACGA
CCTTCTTCAG GTTTTTATAA TACTAAGATG CTGGATATAG CTTATAAGTA TGGTTATCGA
ATCGCACTTG GATCTATATT TCCCTACGAT ACACACATTC CATCATCCTG GTTTGCATCT
AAGCACATTC TATCTAACGT TAGCCCTGGT TCAATTATCA TTTTACATGA TGGGGGGTAT
CGAGGGGAGC GAACAGTATC AACACTAAAA ACTATCTTGC CAAAACTCTC TCAAAGAGGT
TATCAAGTTG TAACCCTTTC AAAACTTCTT ACTTTCCAAC CTAAAAAATC TGACTAG
 
Protein sequence
MELLELTLYL SGLGIGILLF FQPRWLLSIA LLTTPGVVYF VETNEPVVAL TLDDGPDSTT 
TPKILNLLLD YKVHATFFLI STRIFGNETI VTEIVRQGHE LGNHLTDDKP SIRMSTLEFE
AKLLEAQKIL GKFAETHWLR PSSGFYNTKM LDIAYKYGYR IALGSIFPYD THIPSSWFAS
KHILSNVSPG SIIILHDGGY RGERTVSTLK TILPKLSQRG YQVVTLSKLL TFQPKKSD