Gene PCC7424_5574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5574 
Symbol 
ID7112384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011730 
Strand
Start bp25374 
End bp29237 
Gene Length3864 bp 
Protein Length1287 aa 
Translation table11 
GC content42% 
IMG OID643483586 
ProductPrimase 2 
Protein accessionYP_002380595 
Protein GI218442267 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.246626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGTC GTGGTACTCT ATCTATCAAA GCGACGATGA CCCAAATAAG CCACTTAACC 
CCTGTTAGCA CTCGATTAAT CGACGGACTT AAACGCATTC AATCCACAGG GTTAGATTTA
GCCCTGGTTC CTCTAAACAA TAAGAAACAA CCCCTCGGTG ACGGGTGGCA AAATCGACCA
TTCACAGCAA CCCAACTGAT AGAAGCCATA CACAATGGGG GAGTAGAAGT CCCTATCAAA
GGAGAAATTA AAAAAATACA ACCCCAAGGG TTTGGAGTTA TTACAGGAAA TTCCCTAACA
ACTCAACAGG GGACTTATAC CCTCATGGCC GTAGATCTTG ACGGGGCAAG CGCTACTGAT
AAAATGCTTG AACTCTCCAG GAGTAAACCT TTACCCCCTA CCGTCGCCTT TACCTCTACT
CTTCCTGGAA GGTGTCAATA CCTATTTTTA GTGCCAGAAA AATTTAAAAA TCTCATCCGC
ACCAAAAAAA TTAAAACCGG GGTAGTTGGC GACGACGGTA AACCCGAACA AATCGAACTG
CGATATAGTA ACTTACAATC CGTTTTACCC CCGTCCGTTC ATCCCGACAC CGGACAATAT
CACTGGTTAG AAGGCTGTGC CATCGATGAA CTCGAAATAG CATTAGCCCC CGATTGGATC
TTAGAACAAA TGCTTATTGA CAAATCTCCT CTTTTACCCC TCTCACCCCC TCCCCGGCTT
TCAAGCACTG CTCAAAAAAA CAACTCAAAC AAACAATGGA GTGACATTGA CTTTGCTATC
TCTTATCTCA ACGCCCTTTC CTCCTTCCGA GCCGATGATT ATGATGATTG GTTGGCCGTC
GGGATGGCTT TACATAGCGT CGATGATTCA CTTCTGTCAG AATGGGATAA CTGGAGTCGA
ACCTCAAACA AATACAAACC GGGTGATTGT GAGAAAAAAT GGAAATCTTT TTCCAGGGGT
GGCGGCGTAA AATTGGGAAC ATTAGCCCAC ATGGCCAAAT TAGACGGGTG GACTTTTCCA
AAACGTAAAA ATACCCCTCT CTCTTCTCCA GTTAAAACCC CTTCCTCTAA TCAATCAGTT
TCCCTCACTT CAACTGATAA AAAAATAACT GTCACCGGTG ACACCTCAAA AAGGAGTGAC
ACATCAAACC CCCAATTACT AAGCCTTGCG GATACTGTCA CTGCTGTCAC CGCGATTCTT
AAACTAGGAC TAAAAGACTA TGAAGAACAA AATGAACTAG ATTTATTACA ATCTTATTCA
ACCCTCAGCA AAACCGCTTA TCAGCAGTTA GTAAGAACTA TTCGCTGTTC TCTAGATGAA
ATCCAACTCG GTGACACGGA TAAATTTAAC CAACTGGTGA ACTGGCATAA CGCCACCCTA
GACTTTAAAA AAGTCCTCCC TCCCCTAGCT CCGGCATTTA TTCATGACGC ATCTGTCCTC
AATATTGACC CCATTAGCCT CTGGCAGTAT TTTCTCCCCA CCGTGCTATC ATTAACCGGT
AAAAGACTTG ATTTAGATGT AGAATCTCAT CGTATCCCCG GTATCTGCTG GACTTGTGTC
GTGGGTGAAT CCGGAACCGG CAAAACTCGC GCCGAAGGGG TAATTCTCGC GCCCCTAAAA
CAACGACAAC ACCAAGAAAA GAAGCGATGG AAAAACGCCC TCGCTGAGTA TAAACAGATT
TTAAAGAACA AAAAGAAAGA AGATCCTGAC CCGGAACCCC CAACTCCTGA GAAAAAATAT
CTCTTTGAAG TGGCCACCAT TCAAGCGGTC ATGAGAAGAT TAGCCCAGCA GGGGCTAAAT
GGCTCTTTAT GGGCACGAGA TGAGATCGCG GGACTGTTTA AGTCTTTAAG TCAATTTGGA
GGCTCTAAAG GCGAAAATGA AGGGCTAGAA TGTCTGTTAA AAATGTGGGA TGGAAGTGGG
TCATTTGTAG ACCGAGTAGA TGCTGAAACC GACTCCTACG CCGTAGAAGA TACCCGTTTA
AGTATAGCCG GGGGCATTCA ACCGGGAGCA TTTCGTCAAG CCTTTAAAGA TCCCGATGAT
CCCCAAGGGC TTCAAGCACG GTTTTTATAT GCTATTCCCC AGGTTTGTAA ACCCAAACGA
GTTAAAGGGT ACTGTCAACT GAATGACATT TTACCCGAAT TGTATGACTG GCTCTCTAAC
TGTCCCACTG GCTCGGTTAA ATTATCTCGT GAAGCGGACA ATTATTATAC CCATTTAGTC
GAATTTCTGG GAGAAAAAGC AGAAAGTCAC CCTAACCCGG CTATTCGCGC CTGGATGAGA
AAACTTTCTA CTCAAGTCCT AAGAATTGCT TTAGGACTGC ATTTAGTAGA TTGTTATTTC
GACCGTAGCA AAAATATCTG GGTATTACAA CTCGATACTT TAGAAAGAGC AATGGAAGCC
GGTCGATATT ACAGCAGTGC CTTTGAAGTT ATACAAGAGA AAGTGGGCAA TTCAGAAAAT
ATTAGTAGTA TTCTCCTGAA AATTTGGGAT ATGTCCCTAA ATGTGCCAGA GGGTGTCACC
CCAAGAGATA TTTACCGCGC TATTAAAGTT ATCGGCAAGA GAGCGGTTGA AATGGGGCGC
TCTGTAGGAG CTTACACGAT TGAGTTATTT ACCAAGTTAG TGGAGATGGG GAAAGGGATT
ATTGAGAAAA ATGGGCGTAC TGTTCGCTTT AAAGGGATTA TTACCCCACC ACAGCCCCCT
AATAACCCTA ATAATCCTCC TTTTGACCCG AATAATCCTA ATCCTCCTAA AGATCCTACC
CCTCCCCCAT CCCCAAATGG AGACAGTTCA GATGATGGAG ATGAAAATAG TCCCACTGAC
GAGAATATAA GGGATGAAAA TAGTCCCACA GACGAGAATA TAAGGGATGA AAATAGTCCC
ACTGACGAGA ATATAACGGA TGAAAATAGT CCCACAGATG AGAATAATCA TGATGAAAAT
AGTGAGTCCG AGGAGAATAA TCATGATGAA AATAGTGAGT CCGAGGAGAA TCATCATGAT
GAAAATAGTC CCACTGATGA GAATCATCAT GTCGATGAGG AGGTGACAGA AGGGACACAA
CCCCAAACCG AATCAGAGCA AGAGTTAGAA GTGTCACCCG ATGGGGAAGT GTCACCGGTG
ACAGAAGGAG ATTTTAACTC CCTTTCATCA GAAGAAAACA TCAATTGGTT AATGGAATTG
TTAATAGATT TAGAATCATC ACCGTCTGGA AAGAGTTCAC GTTTTCAATC TATTGAGGAG
TTAATAACCT TGTTTCATGA AGCCGAAAAC CGGCTTAATT GTGTTTGGGA CTGGGTTCAT
CAACAATGTC CTAATTACTA TAATCGTCTT TCTTTGGCTG TGTACAAAAT CATGGATTAT
TTTCAACCAA ATGGTCAACC TAAAGAGGTT ATTACCACAC CTGACACAGG GGGAAAACAT
CTCTTGGGAG TTGCGAACTT AGCATCTATT CAAGGATTAT TATTAGCCTG TAAAACAATA
AGCGATTATA ACTCCCTTCT GAAAAAATAC AATCCCCAAC TGATAGAAAA AGCCTATAGG
GTTCTCCCCG AAAAACAACA GCTTATTGTA GATAGTCTAT TAGCCACTTC TGTTCCTTAT
CCAGTGTTTA AGTATAAAGG ACAAAAAACG AGGAATACAG ACGGCTTTGA GATCAAATTA
GGGATGTTAG TGTATTTAGA CTCTAATAAT CGTTCTAAAG CTTATTCAGT TAAGGTTTGG
GCTTTGAATG GAGTAGCATT GGGACAGTGC CAACCTGTGT TTGTTACTCG TTCAAGTTTA
GAAGAGGTGA AAAAGCCATT ACCAACATCT CCATCATCTT TGATGGATTC TATTCAATTA
AGTTTTGAAG AACAATTTTC CTAG
 
Protein sequence
MKSRGTLSIK ATMTQISHLT PVSTRLIDGL KRIQSTGLDL ALVPLNNKKQ PLGDGWQNRP 
FTATQLIEAI HNGGVEVPIK GEIKKIQPQG FGVITGNSLT TQQGTYTLMA VDLDGASATD
KMLELSRSKP LPPTVAFTST LPGRCQYLFL VPEKFKNLIR TKKIKTGVVG DDGKPEQIEL
RYSNLQSVLP PSVHPDTGQY HWLEGCAIDE LEIALAPDWI LEQMLIDKSP LLPLSPPPRL
SSTAQKNNSN KQWSDIDFAI SYLNALSSFR ADDYDDWLAV GMALHSVDDS LLSEWDNWSR
TSNKYKPGDC EKKWKSFSRG GGVKLGTLAH MAKLDGWTFP KRKNTPLSSP VKTPSSNQSV
SLTSTDKKIT VTGDTSKRSD TSNPQLLSLA DTVTAVTAIL KLGLKDYEEQ NELDLLQSYS
TLSKTAYQQL VRTIRCSLDE IQLGDTDKFN QLVNWHNATL DFKKVLPPLA PAFIHDASVL
NIDPISLWQY FLPTVLSLTG KRLDLDVESH RIPGICWTCV VGESGTGKTR AEGVILAPLK
QRQHQEKKRW KNALAEYKQI LKNKKKEDPD PEPPTPEKKY LFEVATIQAV MRRLAQQGLN
GSLWARDEIA GLFKSLSQFG GSKGENEGLE CLLKMWDGSG SFVDRVDAET DSYAVEDTRL
SIAGGIQPGA FRQAFKDPDD PQGLQARFLY AIPQVCKPKR VKGYCQLNDI LPELYDWLSN
CPTGSVKLSR EADNYYTHLV EFLGEKAESH PNPAIRAWMR KLSTQVLRIA LGLHLVDCYF
DRSKNIWVLQ LDTLERAMEA GRYYSSAFEV IQEKVGNSEN ISSILLKIWD MSLNVPEGVT
PRDIYRAIKV IGKRAVEMGR SVGAYTIELF TKLVEMGKGI IEKNGRTVRF KGIITPPQPP
NNPNNPPFDP NNPNPPKDPT PPPSPNGDSS DDGDENSPTD ENIRDENSPT DENIRDENSP
TDENITDENS PTDENNHDEN SESEENNHDE NSESEENHHD ENSPTDENHH VDEEVTEGTQ
PQTESEQELE VSPDGEVSPV TEGDFNSLSS EENINWLMEL LIDLESSPSG KSSRFQSIEE
LITLFHEAEN RLNCVWDWVH QQCPNYYNRL SLAVYKIMDY FQPNGQPKEV ITTPDTGGKH
LLGVANLASI QGLLLACKTI SDYNSLLKKY NPQLIEKAYR VLPEKQQLIV DSLLATSVPY
PVFKYKGQKT RNTDGFEIKL GMLVYLDSNN RSKAYSVKVW ALNGVALGQC QPVFVTRSSL
EEVKKPLPTS PSSLMDSIQL SFEEQFS