Gene PCC7424_5567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5567 
Symbol 
ID7112377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011730 
Strand
Start bp17860 
End bp18702 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content45% 
IMG OID643483579 
ProductStearoyl-CoA 9-desaturase 
Protein accessionYP_002380588 
Protein GI218442260 
COG category[I] Lipid transport and metabolism 
COG ID[COG1398] Fatty-acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.972132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGA ATTTTCTTGA AGCTCCCACA GTAGGGGAGC AATCGCTCAG GGTAAACTGG 
GTTAGTGTAG GTTTCTTTGG AGCGGCTCAC GCGGTAGTTT TGTTAGCCCC TTGGTTTTTT
TCTTGGTCTG CCCTCGGAAT AGCAATATTT TTCCATTGGC TCACCGGTAG TATAGGCATT
TGTTTAGCCT ATCACCGTCT GCTGACTCAC CGCAGTTTTC AAGTTCCCAA ATGGCTTGAA
TATATTTTGG CAATGATTGG CGGATTGGCA TTGCAAGGTG GGCCGATTTT TTGGGTAGCC
GGACATCGCT TGCATCATGC TCACACCGAA GATATTGATA AAGATCCTTA CTCAGCCCAA
CGGGGGTTTT GGTGGAGTCA TATCCTCTGG TTGTTTTACG ACCGTAAAGA ATTTTTTGAC
TACGAAACTT ATAAGCGATT TGCTCCGGAT TTAGCACGAG ATCCCTTTTA TCGCTGGCTC
AACCGTTATT ACTTACTGCT TCAGATTCCG GTAGGATTTG TACTGTATCT GCTTGGCGGT
TGGTCTTTTG TCATCTATGG CATATTTGTC AGAGCCGTTT TACTTTGGCA CAGCACTTGG
TTAATTAACT CGGCCACTCA TATGTGGGGT TATCGCACCT TTGACTCGAA AGATAATTCC
CGTAACCTCT GGTGGGCTGC GATTATCACT TACGGAGAAG GCTGGCATAA TAACCATCAC
GCTCATCCTA ATGTGGTCAA AGCCGGGTTG AAATGGTGGG AAATTGACAT GACGTGGTGG
GCGATTCAGA CTTTAAAGAG TTTGGGTTTA GCTAAAAAGC TTGTGCTTCC TATGGCCAAC
TGA
 
Protein sequence
MTSNFLEAPT VGEQSLRVNW VSVGFFGAAH AVVLLAPWFF SWSALGIAIF FHWLTGSIGI 
CLAYHRLLTH RSFQVPKWLE YILAMIGGLA LQGGPIFWVA GHRLHHAHTE DIDKDPYSAQ
RGFWWSHILW LFYDRKEFFD YETYKRFAPD LARDPFYRWL NRYYLLLQIP VGFVLYLLGG
WSFVIYGIFV RAVLLWHSTW LINSATHMWG YRTFDSKDNS RNLWWAAIIT YGEGWHNNHH
AHPNVVKAGL KWWEIDMTWW AIQTLKSLGL AKKLVLPMAN