Gene PCC7424_5330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5330 
Symbol 
ID7111218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp5914702 
End bp5915682 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content41% 
IMG OID643483536 
Productsuccinate dehydrogenase iron-sulfur subunit 
Protein accessionYP_002380545 
Protein GI218442216 
COG category[C] Energy production and conversion 
COG ID[COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 
TIGRFAM ID[TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTTA TTTTTAAAGT TCTTCGACAA AAATCCAACT CGACCCCTCG TGTTCAATCT 
TATACTCTAG AGGTAGAAGC CGGAAATACT ATTTTAGAGT GTCTCAATCG AATTAAATGG 
GAACAAGATG GAACATTAGC ATTTCGTAAA AATTGCCGCA ATACAATTTG TGGAAGTTGT 
GGGATGAGAA TTAATGGTCG TTCTGCTTTA GCTTGTAAAC AAAATATTGG CGAAGAATTA 
GAGCGCTTTA GTTCGACAAC CAATGGGGGA ATCCCTGAAA TTACGGTTGC TCCAATGGGT 
AATATGCCGG TAATTAAGGA TTTAATTGTA GATATGAAAA GTTTTTGGGA TACTCTCGAA 
GAAGTTGATC CCTATGTTAG CACTAGCGCC CGGATGATTC CAGAGCGAGA ATTTTTACAG 
TCTCCTGAAG AACGAGAACG TCTTGATCAG ATGGGAAACT GTATTTTATG TGGTGCTTGT 
TTCTCTGAAT GTAATGCTAG GGATGTTAAC CCTGAGTTTG TCGGGCCTCA TGCGTTAGCT 
AAAGCTCATC GGATGGTGAT TGATAATCGA GACACCGAAA CCACAACCCG TCTAGAAAAA 
TATAATACCC CTAAAGCCGG TGTTTGGGGA TGTACTCGCT GTTATATGTG TAATGCGGTC 
TGTCCGATGG ACGTTGCTCC GATGGATCAG ATCGGTAAAA TTAAACAAGA AATCCTCAAA 
GATCATGATG CTTCCGAAAG TCGTCAAATT CGCCACCGTA AAGTCCTCAT TGACTTGGTT 
AAACAAGGAG GTTGGGTTGA TGAACGTAAA TTTGGGTTAT ATGTGGTGGG AAATTATTTC 
CGAGATGTTA AGGGACTGAT GAGTCTCGTT CCTTTGGGGT TACGAATGCT TTCTAGTGGG 
AAATTCCCTC TATCATTTGA ACCCTCAGAA GGAACTCAAC AAGTGCGATC GCTCATTGAG 
TCAGTTCAAA ACAATGGATA A
 
Protein sequence
MQVIFKVLRQ KSNSTPRVQS YTLEVEAGNT ILECLNRIKW EQDGTLAFRK NCRNTICGSC 
GMRINGRSAL ACKQNIGEEL ERFSSTTNGG IPEITVAPMG NMPVIKDLIV DMKSFWDTLE 
EVDPYVSTSA RMIPEREFLQ SPEERERLDQ MGNCILCGAC FSECNARDVN PEFVGPHALA 
KAHRMVIDNR DTETTTRLEK YNTPKAGVWG CTRCYMCNAV CPMDVAPMDQ IGKIKQEILK 
DHDASESRQI RHRKVLIDLV KQGGWVDERK FGLYVVGNYF RDVKGLMSLV PLGLRMLSSG 
KFPLSFEPSE GTQQVRSLIE SVQNNG