| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5329 |
|---|
| Symbol | |
|---|
| ID | 7111217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 5913648 |
|---|
| End bp | 5914052 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643483535 |
|---|
| Product | transcriptional regulator, AbrB family |
|---|
| Protein accession | YP_002380544 |
|---|
| Protein GI | 218442215 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 70 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGAAC CTAATCCTTT AACGGGAAAA GCACTACTTC AAAAAGTCAA AGAGCTATCC
AACTTACCGC GTCGGGAAAC AGCGAAACAG TGTGGATATT ACACAGAAAC CAAAGACGGT
CAAATTCGAG TCAATTTAAC AGACTTTTAT GATGCTGTCT TAGGAGCAAA AGGTGTTCCC
CTTGATCCAG GTGGCGTTAA AGATGGCCGT GGACGAGAAC CGACATTTAG AGTCAGTGTT
CACAAAAATG GACAGATTGT CATTGGGTCA ACCTATACTG AGCAAATGGG TTTAAAAGCC
GGTGATGAGT TTGAAATTAA ATTAGGTTAC AAACACATTC ACCTCAAACA ACTTGAAGGA
GAATCTTCTT ATGAAGATGA AGACGAAGAG GCCGTCTCTG CATAA
|
|---|
| Protein sequence | MPEPNPLTGK ALLQKVKELS NLPRRETAKQ CGYYTETKDG QIRVNLTDFY DAVLGAKGVP
LDPGGVKDGR GREPTFRVSV HKNGQIVIGS TYTEQMGLKA GDEFEIKLGY KHIHLKQLEG
ESSYEDEDEE AVSA
|
|---|
| |