Gene PCC7424_5270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5270 
Symbol 
ID7109683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp5842236 
End bp5842943 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content44% 
IMG OID643483477 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_002380486 
Protein GI218442157 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.12238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAA ACGGACAGAC CAAACCTATA GTCATTTCTC CTTCCATCTT ATCCGCAGAC 
TTTAGCCGTC TCGGAGAAGA AATTCAAGCA GTAGACAAAG CCGGGGCTGA CTGGATTCAC
GTCGATGTCA TGGATGGGCG CTTTGTTCCC AACATCACCA TCGGGCCATT GATTGTAGAG
GCGATTCGTC CCTACACCAA AAAACCTCTA GACGTTCATT TAATGATCGT TGAACCCGAA
AAATATGTCC CTGACTTTGC TAAAGCGGGC GCAGATATTA TTTCTGTTCA TGCAGAACAT
AATGCTTCAC CTCACTTACA TCGCACTCTA GGGCAAATTC GGGAATTTGG AAAGCAAGCC
GGAGTCGTGC TGAATCCTTC CACTCCTTTA GAATTAATTG AATATGTGTT GGAATTATGC
GATTTAGTCT TAATTATGAG TGTTAACCCC GGTTTTGGCG GTCAAAGCTT TATTCCTGAA
GTCGTTTCCA AAATACAGAA ATTACGTCAA ATGTGCGATG AAAAAGGGTT AGATCCTTGG
ATTGAAGTCG ATGGAGGTCT AAAACCCGAT AATACTTGGC AAGTTTTAGA AGCGGGTGCT
AATGCTATTG TAGCCGGCTC GGCTGTATTT AAAGCGGCTG ATTACTCTAA AGCCATTGAA
GGTATCCGCC ATAGCAAACG TCCTCAAGCT CAATTAGCAT CTGTTTAA
 
Protein sequence
MTQNGQTKPI VISPSILSAD FSRLGEEIQA VDKAGADWIH VDVMDGRFVP NITIGPLIVE 
AIRPYTKKPL DVHLMIVEPE KYVPDFAKAG ADIISVHAEH NASPHLHRTL GQIREFGKQA
GVVLNPSTPL ELIEYVLELC DLVLIMSVNP GFGGQSFIPE VVSKIQKLRQ MCDEKGLDPW
IEVDGGLKPD NTWQVLEAGA NAIVAGSAVF KAADYSKAIE GIRHSKRPQA QLASV