Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_5270 |
Symbol | |
ID | 7109683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 5842236 |
End bp | 5842943 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643483477 |
Product | ribulose-phosphate 3-epimerase |
Protein accession | YP_002380486 |
Protein GI | 218442157 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.12238 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAAA ACGGACAGAC CAAACCTATA GTCATTTCTC CTTCCATCTT ATCCGCAGAC TTTAGCCGTC TCGGAGAAGA AATTCAAGCA GTAGACAAAG CCGGGGCTGA CTGGATTCAC GTCGATGTCA TGGATGGGCG CTTTGTTCCC AACATCACCA TCGGGCCATT GATTGTAGAG GCGATTCGTC CCTACACCAA AAAACCTCTA GACGTTCATT TAATGATCGT TGAACCCGAA AAATATGTCC CTGACTTTGC TAAAGCGGGC GCAGATATTA TTTCTGTTCA TGCAGAACAT AATGCTTCAC CTCACTTACA TCGCACTCTA GGGCAAATTC GGGAATTTGG AAAGCAAGCC GGAGTCGTGC TGAATCCTTC CACTCCTTTA GAATTAATTG AATATGTGTT GGAATTATGC GATTTAGTCT TAATTATGAG TGTTAACCCC GGTTTTGGCG GTCAAAGCTT TATTCCTGAA GTCGTTTCCA AAATACAGAA ATTACGTCAA ATGTGCGATG AAAAAGGGTT AGATCCTTGG ATTGAAGTCG ATGGAGGTCT AAAACCCGAT AATACTTGGC AAGTTTTAGA AGCGGGTGCT AATGCTATTG TAGCCGGCTC GGCTGTATTT AAAGCGGCTG ATTACTCTAA AGCCATTGAA GGTATCCGCC ATAGCAAACG TCCTCAAGCT CAATTAGCAT CTGTTTAA
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Protein sequence | MTQNGQTKPI VISPSILSAD FSRLGEEIQA VDKAGADWIH VDVMDGRFVP NITIGPLIVE AIRPYTKKPL DVHLMIVEPE KYVPDFAKAG ADIISVHAEH NASPHLHRTL GQIREFGKQA GVVLNPSTPL ELIEYVLELC DLVLIMSVNP GFGGQSFIPE VVSKIQKLRQ MCDEKGLDPW IEVDGGLKPD NTWQVLEAGA NAIVAGSAVF KAADYSKAIE GIRHSKRPQA QLASV
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