Gene PCC7424_5253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5253 
Symbol 
ID7109666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp5829738 
End bp5830997 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content40% 
IMG OID643483460 
Producthypothetical protein 
Protein accessionYP_002380469 
Protein GI218442140 
COG category[S] Function unknown 
COG ID[COG4222] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.462445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACTC TAACCCCTAA ATTGGTCAAC CTTCAAAGTT TAGCTTTAGG ATTATTAAGT 
CCCCTTTCCC TAGGATTATT ATCTCTGCCG GCTCAAGCTC AATCTCTGAC TTTAAACTTT
ATTGGTCAGT CTGTTTTACC CACTGAAACG TTCTATCAAG ATACTCAAGT AGGCGGCTTA
TCTGGGATTG TTTATGATCC AAGCCTGAAG GTTTTTTATG CGATTTCTGA CGATCGCAGT
CAAATTAACC CGGCTCGTTT TTATACTCTA GAACTTGATA TTACTAAATT TAATGGAGGT
CAAGGAACGG GGGGAGTAAC CTTTACAGGT GTTACTCCTC TTTTACAACC GGATGGTCAA
TCTTTTCCAG AATTTAGCCT TGATCCAGAG GGGATTGCTT TAGTCGGAAA TACAGTTTAT
ATTTCTTCAG AAGGGGAAGT TTCCAGCAAT CGGATTATTA ATCCTTTTGT CAATCAATTT
GCTTTAGGAA ATGGTCAACA ACTTGACGCT TTACCGATTC CCGCTCAATT TATTCCTCAA
CCTAATTCAA TTCCCACAAC TAACGGAGTT CGCAATAATG CCAGCTTAGA AAGTTTAACC
GTTACTCCTA ATAAGAAATA TTTATTTACC GCCACTGAAG AAGCATTAGT TCAAGACGGG
CCAGAAACAT CCTTAACCGA AGAAAGTCCG GCGCGAATTT TACAATACGA TCTGTCTACT
GGACAACCAA TCGCCCAATT CCTTTATAAT GTAGATCCGA TCGCTTTAGA GCCTAATCCC
TCGAATGGAT TTAGTACCAA CGGGTTAGTA GATTTACTGG CACTTGATAA CAGTGGCACA
AAATTTATAG CCATAGAGCG GTCTTTTTCA GTAGGAGCAG TGGGAACACC CGGAAATACA
GGCAATACGG TTAAACTTTA TGAAGTTTCT TTAACAGGAG CAACAGATAT CAGTGGATTT
TCGAGTATTG AAGGGGTTAA TGGAATTGTA CCGGTGCAAA AAACCTTACT CCTAGATTTA
ACCACTTTAG GGATTCCCAT TGATAATGTT GAGGGAATAA CTTTTGGCCC TAAACTGCCG
AATGGATATC GCTCCCTAAT TTTAGTCAGT GACAATAACT TTAGTCCGAC CCAGTTTACT
CAATTTTTAG CCTTTGAAGT TGTTCCTGAA CCCTTAACTA TCTTGGGTGC TGGCTCTGCC
GTTGGTTTCG GGGTAGTATT TAAACGTAAA ATGTCTAAGA AGCAATCCAA GGTGCTATAA
 
Protein sequence
MQTLTPKLVN LQSLALGLLS PLSLGLLSLP AQAQSLTLNF IGQSVLPTET FYQDTQVGGL 
SGIVYDPSLK VFYAISDDRS QINPARFYTL ELDITKFNGG QGTGGVTFTG VTPLLQPDGQ
SFPEFSLDPE GIALVGNTVY ISSEGEVSSN RIINPFVNQF ALGNGQQLDA LPIPAQFIPQ
PNSIPTTNGV RNNASLESLT VTPNKKYLFT ATEEALVQDG PETSLTEESP ARILQYDLST
GQPIAQFLYN VDPIALEPNP SNGFSTNGLV DLLALDNSGT KFIAIERSFS VGAVGTPGNT
GNTVKLYEVS LTGATDISGF SSIEGVNGIV PVQKTLLLDL TTLGIPIDNV EGITFGPKLP
NGYRSLILVS DNNFSPTQFT QFLAFEVVPE PLTILGAGSA VGFGVVFKRK MSKKQSKVL