Gene PCC7424_5248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5248 
Symbol 
ID7109661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp5825464 
End bp5826048 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content37% 
IMG OID643483455 
Productprotein of unknown function DUF820 
Protein accessionYP_002380464 
Protein GI218442135 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.73684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACTT TAACTATTCC TCAAAGATTT AAACTTACCC CCGAACAATT TGACGAGCTA 
GCTAACTTCA ATAGGGACGT AAATATGGAG TTAACAGCAC AAGGAGAATT AATGGTTATG
CCACCAACCG GAGGAACAGC CGGCAGAAAA AATCGGCGTT TAACTCAACA ATTAGGCATC
TGGACAGATC TAGATGGAAC GGGAGAATCT TTTGACTCTT CTACAACATT TATATTACCC
AATGGAGCGA GAAGATCTCC CGATTGTAGT TGGATTAAAC TAGACAGATG GAATGCTTTA
ACTCCATCAC AACAAGATGG GTTTCCTCCT ATTGCTCCTG ATTTTATCAT TGAGTTAGTT
AGTCCCAGTG ATTTAACAAA TCAAAGATAT GAAGATTTAC AGGCAAAAAT GCAAGAGTAT
TTAGATAATG AAGTTCGCTT AGGATGGTTG ATTGATTCTG TCAGTAAAAG AGTAGAAATT
TATCGTTTAG GAGAAGCGGT TGAAATTCTC CAAAATCCAA AAACTCTCAA GGGTGAAAAT
GTTTTACCTG GATTTGTTTT AGACTTAGAA CCGATCTGGA GTTAA
 
Protein sequence
MNTLTIPQRF KLTPEQFDEL ANFNRDVNME LTAQGELMVM PPTGGTAGRK NRRLTQQLGI 
WTDLDGTGES FDSSTTFILP NGARRSPDCS WIKLDRWNAL TPSQQDGFPP IAPDFIIELV
SPSDLTNQRY EDLQAKMQEY LDNEVRLGWL IDSVSKRVEI YRLGEAVEIL QNPKTLKGEN
VLPGFVLDLE PIWS