Gene PCC7424_5246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5246 
Symbol 
ID7109659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp5824311 
End bp5824679 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content40% 
IMG OID643483453 
Producthydrogenase nickel insertion protein HypA 
Protein accessionYP_002380462 
Protein GI218442133 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID[TIGR00100] hydrogenase nickel insertion protein HypA 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.911975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAAA CCGACATGAC TAAGGCGTTA ATTCTGACGG TACGAGACTG GTGGGAAGCT 
CAACCTCAAC ACCCCACTAT TTCTCACATT CATTTAATTG TCGGTCAATT TACCTGTGTA
GAACCCGCTA GTTTACAATT TGCCTTTGAA GTCCAAACCC GCAATACTTT TTTAGATGGG
GTAAAATTAA TCATTAAAGA AACTCCTTTA ATTGCTTTTT GTCATCGCTG TCAGAGAGAA
TATCGCCCCG AAATTGGTAT TGCTTATGCT TGTCCTGAAT GTCGATCACC GATGGAGGAT
ATTCGTTCAG GACGAGAACT TAAAATCGAT CGCATAGAAT ACACAGAAAA TTATGCACCA
AACCTTTGA
 
Protein sequence
MHETDMTKAL ILTVRDWWEA QPQHPTISHI HLIVGQFTCV EPASLQFAFE VQTRNTFLDG 
VKLIIKETPL IAFCHRCQRE YRPEIGIAYA CPECRSPMED IRSGRELKID RIEYTENYAP
NL