| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5240 |
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| Symbol | |
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| ID | 7109653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 5818608 |
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| End bp | 5820482 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643483447 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_002380456 |
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| Protein GI | 218442127 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.654587 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACCA AAACACAAAT CGAAGATATT GCCCCTCAAC AGTTATCTCA AGCTGACTTG
AAACCGAGAG GAAGAGTCTA TCCTTCTCCC GTGACTTGGC GCGATCAAAT TTTATACCAA
TTGTTACCCG ATCGCTTTAG TGATGGAAAA GAAGATCAAC GCCCATTATT TGACCATAAT
AACCCCCAAC AGTACAAAAT TAAAGATCAA GCCGGTTGGA TGGCACAGGG AACAAAATTT
GTCGGCGGAA CGCTTAAAGG GGTTGAAAGT AAGTTAGATT ATTTACAGGG ATTAGGGGTG
ACTACCCTGT GGGTTAATCC TCCTTGGAAA CAACGGAAAG ATTTAGAAAC CTATCACGGT
TATGGGATTC AAAATTTCTT AGATATTGAT CCTCGTTTTG GCACAAGGCA AGATTTACGG
GATTTAGTCG ATGCCGCCCA CGATCGGGGA ATGTATGTCA TCCTAGATAT CATCTGCAAT
CATAGCGGCA ATAACTGGTT TTATCTCGAT GACGAGGGGA AACCGAGTAG TACCATGAGA
TACCGCTTTT CTCCTCCCTA TCCTTTTGGG GGTTGGCGTT CTGGACAAGG AGAGGCGATT
ACTGAGATTG TATCTGCGGA AGATGGTGCC TGGCCGAAGG AATTTCAAAA TTTAGACTAC
TACACCCGTT CCGGAGAAAT CGGCGATTGG GGAATAGCCA CTTGGGAAGA CCCTCTAAGT
CCTTTTGTGG AGTATAGACG GGGTGATTTT TACGATCTCA AAGACTTTAA TTTACAACGT
CCTGAAGTGG TTAGATCCCT AGCGCAAGTT TACCAATATT GGATTGCTCT GAGTGATTGT
GATGGGTTTC GCATCGATGC AGTAAAACAT ATTTCAACCC AAGAGTGCAG TGAATTTTGT
ACCCAAATCC GAGAATATGC CTATGCGATC GGGAAGGATA ATTTCTTTTT AACGGGAGAA
ATTACGGATG GTAGTATAGC ACCGGCCTAT ATTGATATTT TGGGGCGTAA TTTAGATGCG
ATGTTAGGTA TTGTGGAGTT TCCCAACCAA TTAACGGCTA CGGCTAAAGG ATTATGCGAT
CCAATTGAAT TATTCTGCCG CTATGAAGCG TTTAGCGCCT ACGGATTTTA TCAACAATTG
GGGCGGTTTA TTGTCTTGGT GATGGATGAT CATGATATGT CTTCCCGACC TAAAAAAGCG
AGATTTGCGG CGGATAGCGA TGTCCCGAAT TTATATCAAC AAATTGCTCA TGCAGTAGGG
ATACAGTTGA CGATTCCGGG GATTCCGGCG ATTTATTATG GCACAGAACA GGCTTTTGAT
GGCAATGAAG ATTATCACGA TTATAACGTC GAGTCTAGGC GCTTTGCTGA GGATCGCTAT
GTTCGGGAGG CAATGTTTGG GGGAGGGTTT GGAGCTTTTG CCACCGAAGG ATGTCACTTT
TTTAACCCCA ATCATCCTAC CTATTTAAGA ATTGCTGCGA TCGCCCGGTT GCGAAATCGA
CAAGATTTAA TCGGTAAAGC TTTACGTCGG GGTAAAGTCT ATTTGCGAGA ATCGTGCTAT
TTAGATTATC CGTTCTCTTT GCCGAAACGA GGAGAGTTAA TGGGATGGTC GATGATTTTA
TTTCAAACAG AAGTATTGAT GGTTTTTAAT ACTCATGGGT TAGAAAATCG GGGAGCGCAA
ATTACTATTG ATGGGGTGTT ACATCCTCAA GGTTCTCACT TGACTTATTT ATATAACAGT
AATTGGGATG ATCAACAGTT GCGCCATCCC CCAGATAATC AAACCGTTCC CGTCAAACAT
GATGATGATG GTAGAGCAAC GATCGAGATT GAGTTACCTC CCTGTGGCAT GGCAATTTTA
GCGTCAACTC AATAG
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| Protein sequence | MSTKTQIEDI APQQLSQADL KPRGRVYPSP VTWRDQILYQ LLPDRFSDGK EDQRPLFDHN
NPQQYKIKDQ AGWMAQGTKF VGGTLKGVES KLDYLQGLGV TTLWVNPPWK QRKDLETYHG
YGIQNFLDID PRFGTRQDLR DLVDAAHDRG MYVILDIICN HSGNNWFYLD DEGKPSSTMR
YRFSPPYPFG GWRSGQGEAI TEIVSAEDGA WPKEFQNLDY YTRSGEIGDW GIATWEDPLS
PFVEYRRGDF YDLKDFNLQR PEVVRSLAQV YQYWIALSDC DGFRIDAVKH ISTQECSEFC
TQIREYAYAI GKDNFFLTGE ITDGSIAPAY IDILGRNLDA MLGIVEFPNQ LTATAKGLCD
PIELFCRYEA FSAYGFYQQL GRFIVLVMDD HDMSSRPKKA RFAADSDVPN LYQQIAHAVG
IQLTIPGIPA IYYGTEQAFD GNEDYHDYNV ESRRFAEDRY VREAMFGGGF GAFATEGCHF
FNPNHPTYLR IAAIARLRNR QDLIGKALRR GKVYLRESCY LDYPFSLPKR GELMGWSMIL
FQTEVLMVFN THGLENRGAQ ITIDGVLHPQ GSHLTYLYNS NWDDQQLRHP PDNQTVPVKH
DDDGRATIEI ELPPCGMAIL ASTQ
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