Gene PCC7424_5223 details

Gene Information

• Locus tag: PCC7424_5223
• Symbol: cbiD
• ID: 7109555
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 7424
• Kingdom: Bacteria
• Replicon accession: NC_011729
• Strand: -
• Start bp: 5799039
• End bp: 5800196
• Gene Length: 1158 bp
• Protein Length: 385 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 643483430
• Product: cobalt-precorrin-6A synthase
• Protein accession: YP_002380439
• Protein GI: 218442110
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1903] Cobalamin biosynthesis protein CbiD
• TIGRFAM ID: [TIGR00312] cobalamin biosynthesis protein CbiD

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 49
• Fosmid unclonability p-value: 0.224158
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAACCTC GTTCGGGCTA CACTTTACCT GTCTTTGCAA GTGCTTCGGC GATTGCTGCA 
CTGCGATATT TACATCAAGA GGAGGTAGGA GAGAAAGTCT GGCTCAATTT GATTGAACCG 
GCGCAAAGAG TAGAGATTGA AATAGAACAA GTGGCTAGGA TAGGAGTCAA TCAAGCGTTA 
GCCATTACTC GTAGCGATCC AGGAGATAAT CTAGACATCA CTCGTCATAC TCCCGTTTGG 
GCTATTGTAG AGTTAAAAGT TAGTCCGGAA AATCTTCAAT CTGTCTCTCC TGGGGAGTTC 
AAGGAAACCG AGTCCATCGG CTCAAAAATC CTCATCCAAG GGGGTGAGGG AGTGGGTAAA 
TTGATTGATC AACCGGGAAA ATCAGCGATT TATCAGTATG CTCAACGACT CCTACGGGAA 
AATCTTGCTC CTCTACTCAA ACCCGAAGAA CAGATCATCG TCACTATTAT CTTACCGGAA 
GGGCGAAAAT TAGCTCAGAG AACCTCTAAT GAAGCGTTTG GGGTGGTTGA AGGACTATCG 
TTGTTGGGGA CTTCGGGAAT TTCTCAACCT CTCAGTGCGA TCGGACAATT AGACGTTTAT 
CTCGAAGAGT TAAAGCTAAA AGCGCGGAAG TTTGACACCC TGGTTTTTTG TGTTGGGGAA 
AATGGGTTAG ACTTAGCGCA GCAAATGGGA ATTAATCCGG AACAACGGGT TAAAACCGCT 
AACTGGTTAG GGCCAATGTT AGTGGCCGCA GGAGTTGAAA AAGTTAAGGG AATCCTCTTA 
TTCGGTTATC ATGGAAAGCT GATTAAACTG GCCGGGGGAA TTTTTCACAC CCATCATCAT 
CTGGCCGATG GACGCTTAGA AATTTTAACC GCTCATTTAG CTCAATTAGG GTTAGCGACC 
TCGATTTTAC AACAGGTCTT TAGGAGTAAG ACGACAGAAG AGGCGTTAAT TTATTTGCGC 
CAATTTGATC AAGAGCATAA TACCCATTGG GTAGAGCAGG TTTATCGAGC GATCGCTGCT 
CAAATAGACG AGCGTTGCTC TGATTATATC CGTAAACATA CTCAAGAATC CGTCTGGGTG 
GGTTCGGTGT TATTTGACCG CGATCGCAGT ATTATTGTCA AAAGTGAAAA TAGTCGATTA 
TTGGGGAATA CTATTTAA 

 

Protein sequence

MKPRSGYTLP VFASASAIAA LRYLHQEEVG EKVWLNLIEP AQRVEIEIEQ VARIGVNQAL 
AITRSDPGDN LDITRHTPVW AIVELKVSPE NLQSVSPGEF KETESIGSKI LIQGGEGVGK 
LIDQPGKSAI YQYAQRLLRE NLAPLLKPEE QIIVTIILPE GRKLAQRTSN EAFGVVEGLS 
LLGTSGISQP LSAIGQLDVY LEELKLKARK FDTLVFCVGE NGLDLAQQMG INPEQRVKTA 
NWLGPMLVAA GVEKVKGILL FGYHGKLIKL AGGIFHTHHH LADGRLEILT AHLAQLGLAT 
SILQQVFRSK TTEEALIYLR QFDQEHNTHW VEQVYRAIAA QIDERCSDYI RKHTQESVWV 
GSVLFDRDRS IIVKSENSRL LGNTI