| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5213 |
|---|
| Symbol | |
|---|
| ID | 7109545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 5787609 |
|---|
| End bp | 5789300 |
|---|
| Gene Length | 1692 bp |
|---|
| Protein Length | 563 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 643483420 |
|---|
| Product | ABC transporter domain protein |
|---|
| Protein accession | YP_002380429 |
|---|
| Protein GI | 218442100 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.00149652 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAA TTAAAGATTT TACCAACATA GCTAAAATAT ACTGGCTATC TGAAGAAAGG
ATAAAAGCTT TTGGACTTTT AATTTCTATT TTTATATTGA TAATAATAGA AACCCATATT
TCGGTACAAA TCATCAAACT AACTGGAGAG TTAGTGACTA ATCTCTCTCA GCAGAATAGT
CAAAAATTTT GGCAAGTCAT TTATACACTT CTCGTAATAA GAATTGCTCA AATACCTCTC
TCTCCTTTGT TAAGATATAT CCAAGATAAA CTGGCTCTGA ATTGGCGTAC CTATTTGACT
GGTCATTATC TCAATAAATA TTTATATAAA CGTTGTTTTT ATGAGATAAG TCACGCTCAT
GTAGTCATGG ATAATCCCGA TCAAAGAATT GCCGAAGAAG TTGAGAAGTT TTGTCAAAGT
TGTCTTCATT TTTTTATTAC TCTTGTTATT AGACCTGTTT TTTTAGTCTC TAATTTGATA
GTTGTTATCT GGGATATATC CCATATTTTA ACCGTATTAA TGGTGATTTT TGCCGTAACA
GGGCTAGTCT CTACTACTAC TATATTTGCT CAAAGATTAG TTAGACTTAA TTTTGACCAA
ATTCAAAAAG AAGCTGATTT TCGTTTTGGC TTACTCCGAA TTCGAGAAAA TGCCGAATCT
ATCGCTTTTT ATCAGGGAGA AAATACAGAG AAAAAAATTC TCAACAGATT ATTTGAACAA
GTCATTAAAA GCAGAAATAA ATTAATTCTT TGGCAAAGCA TTTATTTAGA TGGATTTAAT
AATATGTTTG AATTTCTCCC CATGATTGTA CCCGCTTTGG TTATTGGGCC TTTAATTTTA
TCGGGAGAAC TAGAAGTCGG TAAACTCACT GAAAGTGCAG CAGCGTTTAC GCGAATTTTA
GGGGTAGTAA CGATGGCTTT AAATCAATTC AGTAACTTAA CCGCTTTATT TGCTGGTATG
GAAAGATTAA AAAGTTTTGA TACTTATTTA GATTTAGAGA AGTCAACAAA ATCTAATCAG
ACTCAGAAAA TTACCATCAG AGAAGAAAAT TATTTTCAAC TAGATAATTT ATCTTTACAA
ACTCCTAATC AAAAGTTTTT ATTTAAGAAT TTATCCTATG ATCTGCCCCT AGGGGAAAGT
TTATTAATTA TGGGGCCTAG CGGTTCAGGA AAAAGTTCCC TATTAAGAGC GCTTGCTGGG
TTGTGGGAGA AAGGAACAGG AAAGATTATT CGACCCAATC TAAAAGATAT CTTATTTTTG
CCTCAACGTC CTTATATGGT CATAGGAAGT TTAAAAGATC AATTAATTTA TCCTCACACT
GAATTAGAAG TATCTGAGGA AACACTAAAA GAAGCTTTAG TCAAAGTCAA TCTAGGGAAT
TTATGGAATA AATTTGGGGG TTTCGATGTA GAAAAAGACT GGTGTAAAGT ATTGTCTTTA
GGAGAACAAC AAAGGTTAGC ATTTGCCCGG ATTTTAGTTC AAAAACCTGC CTATGTCATT
CTAGATGAAG CTACCAGTGC TTTAGATGAG AAAAATGAAC AAACCCTTTA TCAACACTTA
AGAGATGCAG GGGTGACTTT TATCAGTGTA GGACATAGAA AAAGCTTGAT GAAGTATCAT
AGCTGTTTCT TACAAATGCC CAAAACACAA GATTTCACAG TTTGCACTCA AGAGATAATC
CCCATTTTCT AA
|
|---|
| Protein sequence | MKAIKDFTNI AKIYWLSEER IKAFGLLISI FILIIIETHI SVQIIKLTGE LVTNLSQQNS
QKFWQVIYTL LVIRIAQIPL SPLLRYIQDK LALNWRTYLT GHYLNKYLYK RCFYEISHAH
VVMDNPDQRI AEEVEKFCQS CLHFFITLVI RPVFLVSNLI VVIWDISHIL TVLMVIFAVT
GLVSTTTIFA QRLVRLNFDQ IQKEADFRFG LLRIRENAES IAFYQGENTE KKILNRLFEQ
VIKSRNKLIL WQSIYLDGFN NMFEFLPMIV PALVIGPLIL SGELEVGKLT ESAAAFTRIL
GVVTMALNQF SNLTALFAGM ERLKSFDTYL DLEKSTKSNQ TQKITIREEN YFQLDNLSLQ
TPNQKFLFKN LSYDLPLGES LLIMGPSGSG KSSLLRALAG LWEKGTGKII RPNLKDILFL
PQRPYMVIGS LKDQLIYPHT ELEVSEETLK EALVKVNLGN LWNKFGGFDV EKDWCKVLSL
GEQQRLAFAR ILVQKPAYVI LDEATSALDE KNEQTLYQHL RDAGVTFISV GHRKSLMKYH
SCFLQMPKTQ DFTVCTQEII PIF
|
|---|
| |