| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5206 |
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| Symbol | |
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| ID | 7109538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 5778589 |
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| End bp | 5780577 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643483413 |
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| Product | glycogen debranching enzyme |
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| Protein accession | YP_002380422 |
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| Protein GI | 218442093 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | [TIGR01561] glycogen debranching enzyme, archaeal type, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0000000110165 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACTCTC AAAAAAATAA TTATCCATTA TCCATTATCC ATTATCCATT ATTTAAAGAA
TGGTTAGTAA CTAATGGAAT AGGGGGTTAT GCAAGTTCAA CAGTAGGGGG TATGCTAACC
AGAGGATATC ATGGATTATT AATAGCCGCC CTTAAACCTC CTCTACAACG TACCCTATTA
TTAACTAAAC TCGATGAAAT TGCCGATTAT AAAAGTAAAA TTTATCCCCT TTATAGCAAC
TGTTGGGCAG ATGGCACACT GGAAAAAGGA GGGGAAATCA ATTTAGAAAA CTTTACAAGA
GAAGGGACTA TTCCGATCTG GAATTATCGC TTAGAAGATG CCAAACTGGA AAAGCGAATT
TGGATGCAAC CAGAAGAGAA TATAACTTAT ATACACTATT CTTTAATTGA GGCAACCGAA
CCCCTAAAAT TATCCGTTAA AGCCTTAGTT AACTACCGGG ATCATCATAG TAGAACCTTT
GGCGGTCATT GGCAAATGCA AATTAACCCG GTTAATTATG GAGTGTGTAT TACTGCTACA
CCAGAAGCAA CCCCGTTTTA TTTATTTTGC TCTCATCCCC AAGCTAAAAT TTTTCTGACT
CCTGTTTGGT ATTATGGATT TAAATTAGCA GCAGAACGCG ATCGAGGATT ATATGATTTA
GATGATAACT TTCTGGCCGC TACTTTTGAA ATAACTTTAA ATGTGAATGA GTCTGTTACT
TTTGTAGCTA GTTGTGACCC TAATCCTAGT TTAGAAGGTA ACACACAATT AAATATCCGT
CGGGCTTATG AACGAGAAAT TATGGACATT TTTCGTAAGA CTAACCCTAA TATTATTAAT
CCTTTTATAG ATCAATTGGT ACTGGCGGCG GATCAATTTA TTGTTAAACG TCCTCTTCCT
AATCAAACCA CAGGAAAAAC TATTATAGCC GGTTATCATT GGTTTAGTGA TTGGGGACGG
GATACGATGA TTAGTTTGCC GGGTTTAACC CTTTCTACCG GTCGTTCAGA AATTGCCCGG
TCTATCCTTT TAACCTTTTC TGAGTATATC AGTCAGGGGA TGTTACCTAA TCGTTTTCCT
GATGATGGCG CACCCTTAAA CGATGGAGAT TATAATACGG TTGATGCAAC CTTATGGTAT
TTTGAGGCTA TTCGTGCCTA TTATGAAGCG ACAGAAGATC ATCAATTTTT AGAGCAAATT
TATCCGATTT TAACTGATAT TATTGATTGG CATTGTCGAG GAACTCGCTA CAATATTCAT
TTAGATCCGC AAGATGGGTT AATTTATGCT GGAGTTGAAG GAAAACAATT AACTTGGATG
GATGCTAAAG TTGGGGACTG GGTGGTGACT CCTCGCATCG GAAAACCGGT AGAAATTAAT
GCCCTTTGGT ACAATGCTTT ATTAACATTA TCTCACTTTT CTCAAAAGTT ACATAAACCT
TGTCAAGTTT ATCAAGAAAT GGCGCAATTG ACATTAAAGG GGTTTCAACG GTTTTGGAAT
GAAGACTTAG GTTATTGTTT TGATGTTTTA GATACTCCTA CAGGGAATGA TAGTTGCTTA
CGTCCTAATC AAATTTTTGC AGTTTCTTTA CCGGCAAGTC CCTTAACGGT TGAGCAACAA
AAAAAGGTAG TTGATGTATG TCAAAAAGAG TTATTAACTC CCTATGGATT ACGCAGTTTA
GCCCCAAGTG ATCCTAATTA TAAAGGAGAT TATCGAGGAG ATCAATTAGA ACGGGATGGC
GCTTATCATC AAGGAATAGT ATGGGGGTGG TTAATTGGGG CGTTTGTGAT GGCTTATTTA
CGGGTTTATC GGGATAAAAA AGGGGCAAAT CAATTTTTAA TCCCAATAAT AGACCATTTA
GAAACAGCCG GATTAGGAAC AATTAGCGAA ATTTTTGAGG GAAATGAGCC GTTTTATGAT
AAAGGGTGTA TTGCTCAAGC TTGGTCAGTA GCAGAAGTTT TAAGAACTTG GTTATTAACT
CAAGATTAA
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| Protein sequence | MNSQKNNYPL SIIHYPLFKE WLVTNGIGGY ASSTVGGMLT RGYHGLLIAA LKPPLQRTLL
LTKLDEIADY KSKIYPLYSN CWADGTLEKG GEINLENFTR EGTIPIWNYR LEDAKLEKRI
WMQPEENITY IHYSLIEATE PLKLSVKALV NYRDHHSRTF GGHWQMQINP VNYGVCITAT
PEATPFYLFC SHPQAKIFLT PVWYYGFKLA AERDRGLYDL DDNFLAATFE ITLNVNESVT
FVASCDPNPS LEGNTQLNIR RAYEREIMDI FRKTNPNIIN PFIDQLVLAA DQFIVKRPLP
NQTTGKTIIA GYHWFSDWGR DTMISLPGLT LSTGRSEIAR SILLTFSEYI SQGMLPNRFP
DDGAPLNDGD YNTVDATLWY FEAIRAYYEA TEDHQFLEQI YPILTDIIDW HCRGTRYNIH
LDPQDGLIYA GVEGKQLTWM DAKVGDWVVT PRIGKPVEIN ALWYNALLTL SHFSQKLHKP
CQVYQEMAQL TLKGFQRFWN EDLGYCFDVL DTPTGNDSCL RPNQIFAVSL PASPLTVEQQ
KKVVDVCQKE LLTPYGLRSL APSDPNYKGD YRGDQLERDG AYHQGIVWGW LIGAFVMAYL
RVYRDKKGAN QFLIPIIDHL ETAGLGTISE IFEGNEPFYD KGCIAQAWSV AEVLRTWLLT
QD
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