Gene PCC7424_5194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5194 
Symbol 
ID7109526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp5767095 
End bp5767760 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content43% 
IMG OID643483402 
Productendonuclease III 
Protein accessionYP_002380411 
Protein GI218442082 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones7 
Fosmid unclonability p-value4.03252e-16 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAATATTA CTCGCAAGAA AACAACTCAA TCAAAACGCG CCTTAGAAAT ATTGGCGACA 
CTAGAGCATC TCTATCCGGA GGCCACTTGT AGTTTAACCT ACGAAACTCC TGTGCAACTT 
CTTGTCGCTA CGATTCTTTC CGCCCAATGT ACGGATGAAC GGGTAAATCA AGTCACTCCT 
AACTTATTTG CCCGTTTTCC CGATGCGTCT AGTCTCGCTA ATGCCCCCAG AGAAGACCTA 
GAGATCTTAA TTCGCTCTAC GGGATTTTAT CGCAATAAAG CCAAAAATAT ACAGGGTGCT 
TGTCAAAAAA TAGTCTCTGA ATTTGGGGGA GAAGTCCCAC AGCAGATGGA AAAACTGCTG 
AGTTTGCCCG GAGTCGCCCG CAAAACTGCT AATGTGGTAT TAGCTCACGG ATTTGGTATT 
ATACAAGGGG TAACGGTGGA TACCCACGTT AAACGGCTGA GTGGACGGTT AGGATTAACA 
AAAGAAACTG ATCCGATTAA AATAGAGCGA GATCTCATGA CCCTATTACC TCAACCCGAC 
TGGGAAAATT TTTCAATTCG GATTATTTAT CATGGTCGGG CAGTTTGTAA AGCTCGTAAA 
CCGGATTGTG ATAGATGTAA ATTAGCCCAT CTTTGTCCTT CTGCTGAAAT TAAGTCAACT 
CGATAA
 
Protein sequence
MNITRKKTTQ SKRALEILAT LEHLYPEATC SLTYETPVQL LVATILSAQC TDERVNQVTP 
NLFARFPDAS SLANAPREDL EILIRSTGFY RNKAKNIQGA CQKIVSEFGG EVPQQMEKLL 
SLPGVARKTA NVVLAHGFGI IQGVTVDTHV KRLSGRLGLT KETDPIKIER DLMTLLPQPD 
WENFSIRIIY HGRAVCKARK PDCDRCKLAH LCPSAEIKST R