Gene PCC7424_5193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5193 
Symbol 
ID7109525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp5765997 
End bp5767088 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content45% 
IMG OID643483401 
Productmembrane-associated zinc metalloprotease 
Protein accessionYP_002380410 
Protein GI218442081 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0750] Predicted membrane-associated Zn-dependent proteases 1 
TIGRFAM ID[TIGR00054] RIP metalloprotease RseP 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.000000000000035702 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCGTAT TGGCAGCGAT CGCCGTTTTA GCTTTATTAA TAGTCGTACA CGAGTTAGGG 
CACTTTGCAG CAGCCCGTTT ACAAGGAATT CATGTCAACC GTTTTTCCAT CGGGTTTGGC 
CCTGCTTTAG CCAAATATCA AGGCGCAGAG ACAGAATATG CCGTCCGTGC CATTCCCCTA 
GGCGGTTATG TGGGCTTTCC CGATGATGAC CCAGAAACTG AAATTCCGGC AGATGACCCC 
AATTTACTCC GCAATCGTCC TATTTTAGAT CGAGCTATTG TTATCAGTGC CGGAGTCATC 
GCCAATTTAG TCTTTGCTTA TTTTCTCTTA GTCGGGCAGG CCGCTACCAT TGGGTTTCAA 
GATATGAATT ATCAGCCAGG GGTAGCTATT CCTGAAATTC TAGCCGGAGA AAATAGCGCG 
GCGGTTGTCG CAGGAATTGA ACCCGGAGAC GTAATTTTAG CGGTGGACTC TCAAAAACTA 
GAGGCTTCCC CAACCGCTAT TATGACCTTA AGAGAAACCA TACAACAGTC TCCTAATCAA 
CCTCTAGTCT TAACCATTCA ACGGGAAGAG AAAACCCTCA ACCTCACCGT TACTCCCACC 
CAAGGGGCGG ACGGAAAAGG GAAAATAGGC GTTATTCTTA CCCCCAATGG GGAAGCTATC 
CTTCGTAAAG CGGACAACTT TTTTGAGGCA TTTACCCTAG GCGCGACTGA ATATCAACGG 
TTAGCAGACT TAACAACCAA AGGATTTTGG CAATTAGTCA GCAATTTTAA AGAAAATGCT 
CAACAAGTCG CCGGCCCAGT CAAAATTGTT GAATACGGAG CAACCATCGC CCAAAATAAT 
GCCGGAAATC TACTCCAATT TGCTGCCATT ATCAGCATTA ACTTAGCCAT TATTAATATT 
TTGCCCTTAC CTGCCCTTGA TGGCGGTCAA CTGGTCTTTT TAGGAATTGA AGCCTTAAGA 
GGAAAACCTT TACCCCTAAA AGTGCAAGAA GGGATCATGC AAACGGGATT AGTCCTATTA 
TTAGGGTTAG GAGTCGTCCT GATTGTTCGG GATACCCTTA ATTTGGCTAT TTTTCAAAAA 
CTTTTTCAGT AA
 
Protein sequence
MSVLAAIAVL ALLIVVHELG HFAAARLQGI HVNRFSIGFG PALAKYQGAE TEYAVRAIPL 
GGYVGFPDDD PETEIPADDP NLLRNRPILD RAIVISAGVI ANLVFAYFLL VGQAATIGFQ 
DMNYQPGVAI PEILAGENSA AVVAGIEPGD VILAVDSQKL EASPTAIMTL RETIQQSPNQ 
PLVLTIQREE KTLNLTVTPT QGADGKGKIG VILTPNGEAI LRKADNFFEA FTLGATEYQR 
LADLTTKGFW QLVSNFKENA QQVAGPVKIV EYGATIAQNN AGNLLQFAAI ISINLAIINI 
LPLPALDGGQ LVFLGIEALR GKPLPLKVQE GIMQTGLVLL LGLGVVLIVR DTLNLAIFQK 
LFQ