Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_5168 |
Symbol | |
ID | 7109500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 5735748 |
End bp | 5739041 |
Gene Length | 3294 bp |
Protein Length | 1097 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643483377 |
Product | hypothetical protein |
Protein accession | YP_002380386 |
Protein GI | 218442057 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.00264465 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCTGCAA CCGTTGAAGA AAAAAGCATG GTTCCTACTA TTTTAGTGGG GATTGGAGGA ACGGGTCATG AGGTCTTGGC GCGAGTCAGA AGGTTAATTG AAGAAACCTA TGGCAATCTC CAGAATTTTC CCATCGTTAG CTTTTTAATT GTTGACACCG ATAAAGATTA TAAAATTACT AATCCTGAAG CCGGCGGTTC ACCCTTTAAA GATATCGAAA AACACTGGGC CAGAGTCAGT GGGAAACAAG TTCGGGAAAT GGTGTCGGAG ATGGAAAAAT TTCCCTGGAT TAATAGTTGG TTTCCCAGAG AACTTGAACG TAATATTACC TCCTTAGAAG CCGGTGCCGG ACAAATTCGC GCCTGTGGAC GGTTTGCGTT TTTTTGTAAT TATCATGATA TTAGCCGTAA ATTTCTCGAT GCACTCAAAC GGGTAAAAGG TCGGGAAACT TATATGTTAG ATCGTTATGG GATTAAAGTC GCTAATAATG CGGTTAATGT GTTTGTAACT GGCTCTCTCA GTGGCGGGAC AGGAAGCGGA ATGTTAATTG ATATGGGCTA TTGTATCCGC AATTGGTTAC GGGGGGAAGG GAGTCCTTTA ATTACCGCTC TTGTTCCCTC TCCCGAAGCT TTTGTGAGTA TTAATGTGGG CGATCGGGTT TTGTCTAATG GTTACGCCGC CTTAATGGAA TTAAATTATT ATTCAGATCA TCGCACCGAA TACAATCAAC AATATAGCGC CGGATTAGTC GATGAAGTTC GCAGTAAATT ACCTCCCTTT GATTTTACTT ATTTAGTCGG GACAAAAAAC GGCGAAAGTG ATTTTAAATT AGAGCAAATT CGAGAAATGA TCGCTCAAAA TATTTTCTTA GATATGACCT CAGATTTTGC CCCTCATAAA CGGTCTATTC GAGATAATAT TAAAGGAGCT TGGGCACAAG CTGACCCCGG AGGAAGAGGT TATCCTAAAC AATTTATGAG CTTTGGATTG TCCACCATCG AAATTCCTAT CGCTCAAATT CGCTCCACCC TATACTATAG ACTCGCTCAA GATTTAGTCC AATGGTGGTT TAATGAAGAG GCTATTTTAC CCGCTCAAAT GATGGAATTA GTGCGGAATG ATACCTTAAA AAGAATGCGT CTCACTGAAG CAGAATTAGT GATGGATTTA GGGGCGGCAG AAAATAAATC AATTATTGCC CTCATTTCTG AATGGATGAA TAAAATTCGT CAAGAAATTG TCCAAGAAGA TTGGCTTAAT TGTACCCAAC AGGGAGTCAA TATGATGGGG GCAGAAAGAG GAAAAATTGT CAGATTTATA GAGGAATATT TAACCCCAAC TGTGGAAAGT TACCGCAACG ATCATTTTAT TGAAATGAGT CCTGATGAAC GGCTTCATGG GGATTATTTA AAGAAAATTT ATAATAATAG AGATAATATT ATTCAACAGG GAAGAAAAGC TTTAGAAGAA GAATTATATT TAATTTTAGA AGATAGAACA CGCGGACTTA AATATGCTGA TAGTTTTATG ATAGCAGTCC GACAAATTTT AGATAGCATG GCCGAAAAAT TTCGTCGAGA TCTAGATAAA GTTTGGAGTC AAAACGAAAC AAATCGACAA AAACAATATG AAGAAGGATT AAAAGAAATT CAAGAATTTA AAAATAAATT TGGCATTACT AAAAAAGAAA AAATGGAGGA ATATTGTAAT CAGGCTTTAA TGGGATTAGA AGGAAGTTTA ATTGCCACAA TTCAACGAAA AGTTAGGGCA ACCGGATTAG AGGTTATTTT CCGTCTAAAA GAACATCTAG ATAAATTAGA AAGACGCTTG AGTCGTTTCC AACAAAAGTT AATCCAAGCG AGGGATTTAT TTAAACTTAA ATCCGAGCAA CAAGCGGATA GTGCCGATGC GTTAATGGTG AATGGCATTA AAATATATGA TCGCCAAGAA TTAAATAGTC TCTATCAAGA TATGATAGAA CAATTTGCCG GGGGTAAAGG AGGGGCAAAA AGTCCCTATC AAATCGGATT AGATGCTATC TGTAGCACCC TGTCTGAAGA TGTGTTAAAA ATAGCCAGTC CTTTATGGAA AGAAACCCGT CTCGCTAGTG AAATCATGCG TCTGTTTGAT GTGACTGAAA TTCCCGACGT AAGGGATGAA GATTTTCGAG AAATTATTGC CGAAAGATGT AAAACTGTCA TCATTAATGC TCCAGAAAGT AGTAAACTAA AACGAGAGTT AGCGGCTTGC GATCGGCTTT TCAAAATCCT CAATGATGAT TTAGAAATCG TTAATAATCT TCGCATTGCT TACCAAAAAT CGAGTCCTTT AATTTTACTG AATCGAGCGA TTTTACAGGG AAAAGATGCA GGGTTTACTC CGGCGAGAAA TATTAATGTT GCCTTATTGG GAGGACGAAA TACCAGCGAT CCGGCGGCTC AAAAAATCTT ACCCAAATTG CAAGAATTAG AAGGGATTAA CGATGATAAT ATTAAACCTT TAGGAAATCC AGAAAGACAT CGTATTGTTT TTGTTCAAGA AATAGGAGGG TTTTCTTTAC GATGTATTGA CGGAATGCGA GATCTCAGAC AATCCTATCA AGATTGGAAA GGAGATTTTA TTGTTGCCAA ACGAGCGCAA CAAGTAGGAG AAAGTCGAGA TCTTCCGATT CCCGTTCATA TTCAAAAAGA ACCCCCTTTC TGGGATATTT TCCCTGAAGA TGCCAGCATA TTTAAATTAG TTATAGAAGC AAGAGCTTTA AAAGTATTGT ATCAGGATAC AAATCGGGTA ACTCATGAAA ATACCATTCG TTATGATGTA AAAACTGCCA CCGGATTGAA AAAAATTGAT CTGGCAGGCA CTTGGGAAGA AGCGGTACAA GTCTTACAGG TTAAAGCTTG TCGTGGTGAT AAAGAAGAGA TTCAGCGTCA AATTAATTTG ATATTAAGTA ATTTAAAAAC TCCTGAACAA AAGCAAGCAT TGTATGAACA TTTATTAGAA TATTTACAGG AAAGAGCTAG AGAGTTAGAG GCACAAGGAG GGGAAGAAAG TCCCGAATAT AAACGAGAAG ATAAAATTAT TTTGGATTTA ATTACGAGTA AAAAATTAAA AATAGAAACA GTTTTACATT TATCAGATGA TTCTGAACCT GAACCTATTA TTAGTTCTCA ACCCGTTTCT ACTCCTCAAC TTCAACCTAC CCAAACCGAA ACGATTTTCT GTACTAATTG CGGCCATAAA AATCCTGCTA AGGCTAATTT TTGCTCTAAA TGTGGCACGA AATTAGTTAA ATAG
|
Protein sequence | MPATVEEKSM VPTILVGIGG TGHEVLARVR RLIEETYGNL QNFPIVSFLI VDTDKDYKIT NPEAGGSPFK DIEKHWARVS GKQVREMVSE MEKFPWINSW FPRELERNIT SLEAGAGQIR ACGRFAFFCN YHDISRKFLD ALKRVKGRET YMLDRYGIKV ANNAVNVFVT GSLSGGTGSG MLIDMGYCIR NWLRGEGSPL ITALVPSPEA FVSINVGDRV LSNGYAALME LNYYSDHRTE YNQQYSAGLV DEVRSKLPPF DFTYLVGTKN GESDFKLEQI REMIAQNIFL DMTSDFAPHK RSIRDNIKGA WAQADPGGRG YPKQFMSFGL STIEIPIAQI RSTLYYRLAQ DLVQWWFNEE AILPAQMMEL VRNDTLKRMR LTEAELVMDL GAAENKSIIA LISEWMNKIR QEIVQEDWLN CTQQGVNMMG AERGKIVRFI EEYLTPTVES YRNDHFIEMS PDERLHGDYL KKIYNNRDNI IQQGRKALEE ELYLILEDRT RGLKYADSFM IAVRQILDSM AEKFRRDLDK VWSQNETNRQ KQYEEGLKEI QEFKNKFGIT KKEKMEEYCN QALMGLEGSL IATIQRKVRA TGLEVIFRLK EHLDKLERRL SRFQQKLIQA RDLFKLKSEQ QADSADALMV NGIKIYDRQE LNSLYQDMIE QFAGGKGGAK SPYQIGLDAI CSTLSEDVLK IASPLWKETR LASEIMRLFD VTEIPDVRDE DFREIIAERC KTVIINAPES SKLKRELAAC DRLFKILNDD LEIVNNLRIA YQKSSPLILL NRAILQGKDA GFTPARNINV ALLGGRNTSD PAAQKILPKL QELEGINDDN IKPLGNPERH RIVFVQEIGG FSLRCIDGMR DLRQSYQDWK GDFIVAKRAQ QVGESRDLPI PVHIQKEPPF WDIFPEDASI FKLVIEARAL KVLYQDTNRV THENTIRYDV KTATGLKKID LAGTWEEAVQ VLQVKACRGD KEEIQRQINL ILSNLKTPEQ KQALYEHLLE YLQERARELE AQGGEESPEY KREDKIILDL ITSKKLKIET VLHLSDDSEP EPIISSQPVS TPQLQPTQTE TIFCTNCGHK NPAKANFCSK CGTKLVK
|
| |