| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5165 |
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| Symbol | murD |
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| ID | 7109497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 5732988 |
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| End bp | 5734337 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643483374 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_002380383 |
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| Protein GI | 218442054 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0000147173 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCCAAAG CTACCATTAT CGGACTCGGA AGATCGGGAA TTGCAGCCGC AAGAGTATTA
AAAGGGGACA ATTGGGAGGT TACGTTAAGC GATCGCTCTA ACAGTCCCAA TTTACAGCAA
ACTCAAGGCC AACTACAACA AGAAGGAATA ACCGTTAAAC TGGGAGACAG TTTTACCCTC
AACCCCGAAG ATTTACCGAA TTTGATCGTG GTGAGTCCGG GAGTGCCTTG GGATATTCCC
GTTTTAGTCG AGGCTAGAGA TCAAGGCATT GATACCATAG GAGAATTAGA ATTAGCGTGG
CGCTATCTTA ATGGTTGTTC ATGGGTAGGA ATAACGGGAA CTAACGGCAA AACCACCACA
ACCGCCCTGA TAGCAGCTAT TTTCAAAGCC GCAGGATTGA ACGCTCCGGC CTGTGGTAAT
ATTGGCTATG CCGCCTGTGA ATTAGCCTTA ACTCAACAGT CTTACGATTG GATTATTGCG
GAAATTAGTA GCTATCAAAT CGAATCTTCT GCGACTTTAT CGCCAAAAAT TGGCATTTGG
ACAACCTTTA CCCCCGATCA TCTCGAACGT CACAAAACTC TAGACAATTA TTATCAGATT
AAAGCGTCTT TACTCAGTCG TTGTCGCCGT CAAATTTTCA ACGGGGATGA TCCCTATTTA
CATAACATTG GGTTGAGTCA ATGGAAAGAT AGTTATTGGA CAAGTGTAAA AGGAAAAGAG
GCTTTATTGT GCGATCCTTC TAAAGGAATT TACCTTCAGG ATAACTGGAT AGTTGCTTTT
GGGGAATTAA TTGCTCCGAT TAATTTATTT AAAATGGTTG GAGAACATAA CCAACAAAAT
TTATTAATGG CTGTTGGGGC AGCTAGATTA GCCGATATTA ATAAAGATGC GATCGCTGAA
GCTATGGCGA CTTTTTCGGG TGTTCCTCAT CGCTTAGAAT TAATTCGCAC AATTGCCGGT
GTAGATTACA TTAATGATAG TAAAGCGACT AATTATGATG CGGCTCAAGT GGGATTATCT
TCGGTTGAAG CTCCTGTTAT TTTAATTGCC GGTGGGCAAG CTAAAAAAGG GGATGATACA
GAATGGATTA AATTGATTAA AGCGAAAGTC GCAACAGTAT TATTAATAGG AGAAGCCGCC
TCAACTTTTG CTCAACGATT ACAAGAATCA GATTATTATG CTTATGAAAT TGTAGAAACA
ATGGAAAATG CAGTTGAACG ATCAGCCTCA TTAGCAACAG ATAAAGGGGT TAAAATCGTG
TTATTATCGC CAGCCTGTGC CAGTTTTGAT CAATATCAAA GTTTTGAACA TCGAGGAGAT
CATTTTCGGG AATTATGTTT ACAGTTATAA
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| Protein sequence | MPKATIIGLG RSGIAAARVL KGDNWEVTLS DRSNSPNLQQ TQGQLQQEGI TVKLGDSFTL
NPEDLPNLIV VSPGVPWDIP VLVEARDQGI DTIGELELAW RYLNGCSWVG ITGTNGKTTT
TALIAAIFKA AGLNAPACGN IGYAACELAL TQQSYDWIIA EISSYQIESS ATLSPKIGIW
TTFTPDHLER HKTLDNYYQI KASLLSRCRR QIFNGDDPYL HNIGLSQWKD SYWTSVKGKE
ALLCDPSKGI YLQDNWIVAF GELIAPINLF KMVGEHNQQN LLMAVGAARL ADINKDAIAE
AMATFSGVPH RLELIRTIAG VDYINDSKAT NYDAAQVGLS SVEAPVILIA GGQAKKGDDT
EWIKLIKAKV ATVLLIGEAA STFAQRLQES DYYAYEIVET MENAVERSAS LATDKGVKIV
LLSPACASFD QYQSFEHRGD HFRELCLQL
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