Gene PCC7424_5134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5134 
Symbol 
ID7108033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp5699454 
End bp5700749 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content32% 
IMG OID643483343 
Producthistidine kinase 
Protein accessionYP_002380352 
Protein GI218442023 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0000000139793 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTCTTT TAATAGATTC ATCTCCTTAT CAGCCAATTT ATGCTCTCTG GAGTAACAAT 
TTTTATCTTT TTAATGGGGG TTTATTAGTC ATTATTTTAG CCCTATTTAA CCTCGTATTT
AAAATTCATA ACCTCAAAAA AATTAACCAA CAACTCTTAC AACAAATAGA TCAGAGCAAG
GAAACTGAAG CTCGGTTAAA ACTCGTGTTT GAACACTCTT CAGATGATCT GTTATTAATG
ATTTTAGATC ACCCCATTGA CTGGAATAAT AGTATAGATA AAGAAAAAAC ACTAGATTAT
GTTTTTGCTC ATCAAAAAGT AATGAACATT AATCATTCTA GTCTCCAACA GTACGGAGCA
ACTTTAGAAG AGTTTTTAGG ATTAACCCCG AATGAATTAT TTGCTCATGA TTTAGAGCAA
GGACGAAAGC TTTGGCGTAA CTTGTTTGAC GCAGGAAAAT TACATCAAAA AACTCATGAG
CGCAAATTAG ATGGTACACC TATTTTAATT GAAGGAAATT ATATTTGTTT TTATGATGAA
CAGGGTAGAA TTAAAGGACA TTTGCGAATT AACCCCAACT CTAACCTATT AAAAACTCTG
GAAAATAAAG CTATTCAAAT TGACAAACTT TATCAAGAAA TTGACACTTT TTTTTATTCA
GTGTCTCATG ATTTACGCGC TCCTTTACGG CATATTAATG GCTTTCTTAA TGCTTTAAGA
AAAGAATTAA ATCAGCTTAA TAATGTTGAG TTATCTAAAG TTAATCATTA TTTAGAAATA
ATAGACGAAA GTAGTCAAAA AATGTCTCAA CTGATAGATG GATTATTGAC TTTGTCTCGC
CTAGAACGAC GAGAATTAAT TTTAAATACA GTTTCTTTAC GTCCTTTAGT TGCAACGGCT
ATTAATTTAG TGACTTTTTC TAGAACTAGA GAAAATCTTG ATTTTAAAAT TGGAAATTTA
CCGAAGGTTA AAGGGGATTC TATTTTATTG CAACAGGTAT TTGTAAATTT AATTGATAAT
GCCGTTAAAT TTAGTGAAAA TCGCTCACCA GCTATTATTG AAATTGATTC AACAGCAGAT
AATACCATCT TTGTCAAGGA TAATGGCATC GGTTTTTCTA TGGAATATGC TGATAAACTT
TTTGGGGCTT TTCAACGTTT GCACCCAGAG AAAAACTTTC CAGGAACGGG TATTGGATTG
TCTATTGTAC AGCGTATTAT TCACCGTCAT GGGGGAAAAA TTTGGGTTGA AAGTGAGCCA
GAAAAAGGAG CTACCTTTTA TTTTAAACTT AACTAA
 
Protein sequence
MTLLIDSSPY QPIYALWSNN FYLFNGGLLV IILALFNLVF KIHNLKKINQ QLLQQIDQSK 
ETEARLKLVF EHSSDDLLLM ILDHPIDWNN SIDKEKTLDY VFAHQKVMNI NHSSLQQYGA
TLEEFLGLTP NELFAHDLEQ GRKLWRNLFD AGKLHQKTHE RKLDGTPILI EGNYICFYDE
QGRIKGHLRI NPNSNLLKTL ENKAIQIDKL YQEIDTFFYS VSHDLRAPLR HINGFLNALR
KELNQLNNVE LSKVNHYLEI IDESSQKMSQ LIDGLLTLSR LERRELILNT VSLRPLVATA
INLVTFSRTR ENLDFKIGNL PKVKGDSILL QQVFVNLIDN AVKFSENRSP AIIEIDSTAD
NTIFVKDNGI GFSMEYADKL FGAFQRLHPE KNFPGTGIGL SIVQRIIHRH GGKIWVESEP
EKGATFYFKL N