Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_5131 |
Symbol | |
ID | 7108030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 5695559 |
End bp | 5696644 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643483340 |
Product | TPR repeat-containing protein |
Protein accession | YP_002380349 |
Protein GI | 218442020 |
COG category | [R] General function prediction only |
COG ID | [COG0457] FOG: TPR repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.00000131061 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCAAGC CATTCAGACC ATTGATTAGC TTGTTAACAC TTGTTCCTAT ATTGAGTTTT GGGATTGAAC CTGTCAAGGC ACAATCTCCT CGCTCAAACC CACAACCGTT GTTAGCTCAA AACTCTCAAA ATTCGGTTGA AGTATTATTT AATCAAGGTG TCGCTAAAAT CAAGGCCGGA AATTTTTCCG CAGCCATCAA AGATTTTACC GAAGTGATTC GCCTGAATCC TAATTTACCA GAAGCCTATA ACAACCGGGG AAATGCTCGT AGTAAATTAG GAGATAACAA AGGCGCGATC GAAGACTATA ATCAGGCTAT AAACCTTAAC CCTAAGTCAG AGCAAGCCTA CTATAATCGA GGGAAAGCCC GTAGTGAATT AGGAGATAAC AAAGGCGCGA TCGAAGATTA TAATCAAGCG CTCAACCTTA ATCCTAACTC GGCTGAGGCT TATAATAACC GAGGAATTAG CCGTCATGAA TTGAAAGATC ATGTAGGGGC GATGCAAGAC CTTAATCAAG CTATTCGTCT GAATCCTAAG ATGGCTGAAG CTTATAGCAA CCGAGGCAAT GTTCGTACAA CGATAGGAGA TACTTTTGGG GCATTTAAAG ACCTCAATCA CGCTATTGGC CTTGATCCTA ACTCGGCTGA GGCTTATAAC AACCGAGGGG TTACTTATGC TAGAGTGGGC GATTACCAAA AGGCATTCCA AGACTTTAAT CAAGCTATTG GCCTTGATCC TCAGTTAGGT CTAGCCTACA ATAACCGAGG GGTTATGCGT AGAGAGTTCG GCGATCATGC CGGAGCCATT CAAGATCTTA ATCAGGCCCT TCGCTTTGAT CCTAAGTTGG CTAAAGCCTA CAATAACCGA GGGGATACCC ACAGAGAGTT AGGCAACCAT CGGGAGGCTA TCCAAGATTA TGATCAAGCG GTTCGCCTTA TTCCTGACAA TCCTAATATT TATTACTATC GAGGGGTTGT TCGCACTCAG TTAGGAGATT TTCAAGGGGC GATCGAAGAT TATCATCAAG CGGTTACTAT TGATCCTAAA CTGTTTATTT TGGATACAAG ACCTCAACCG AGATAA
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Protein sequence | MIKPFRPLIS LLTLVPILSF GIEPVKAQSP RSNPQPLLAQ NSQNSVEVLF NQGVAKIKAG NFSAAIKDFT EVIRLNPNLP EAYNNRGNAR SKLGDNKGAI EDYNQAINLN PKSEQAYYNR GKARSELGDN KGAIEDYNQA LNLNPNSAEA YNNRGISRHE LKDHVGAMQD LNQAIRLNPK MAEAYSNRGN VRTTIGDTFG AFKDLNHAIG LDPNSAEAYN NRGVTYARVG DYQKAFQDFN QAIGLDPQLG LAYNNRGVMR REFGDHAGAI QDLNQALRFD PKLAKAYNNR GDTHRELGNH REAIQDYDQA VRLIPDNPNI YYYRGVVRTQ LGDFQGAIED YHQAVTIDPK LFILDTRPQP R
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