Gene PCC7424_5131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5131 
Symbol 
ID7108030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand- 
Start bp5695559 
End bp5696644 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content43% 
IMG OID643483340 
ProductTPR repeat-containing protein 
Protein accessionYP_002380349 
Protein GI218442020 
COG category[R] General function prediction only 
COG ID[COG0457] FOG: TPR repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.00000131061 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCAAGC CATTCAGACC ATTGATTAGC TTGTTAACAC TTGTTCCTAT ATTGAGTTTT 
GGGATTGAAC CTGTCAAGGC ACAATCTCCT CGCTCAAACC CACAACCGTT GTTAGCTCAA 
AACTCTCAAA ATTCGGTTGA AGTATTATTT AATCAAGGTG TCGCTAAAAT CAAGGCCGGA 
AATTTTTCCG CAGCCATCAA AGATTTTACC GAAGTGATTC GCCTGAATCC TAATTTACCA 
GAAGCCTATA ACAACCGGGG AAATGCTCGT AGTAAATTAG GAGATAACAA AGGCGCGATC 
GAAGACTATA ATCAGGCTAT AAACCTTAAC CCTAAGTCAG AGCAAGCCTA CTATAATCGA 
GGGAAAGCCC GTAGTGAATT AGGAGATAAC AAAGGCGCGA TCGAAGATTA TAATCAAGCG 
CTCAACCTTA ATCCTAACTC GGCTGAGGCT TATAATAACC GAGGAATTAG CCGTCATGAA 
TTGAAAGATC ATGTAGGGGC GATGCAAGAC CTTAATCAAG CTATTCGTCT GAATCCTAAG 
ATGGCTGAAG CTTATAGCAA CCGAGGCAAT GTTCGTACAA CGATAGGAGA TACTTTTGGG 
GCATTTAAAG ACCTCAATCA CGCTATTGGC CTTGATCCTA ACTCGGCTGA GGCTTATAAC 
AACCGAGGGG TTACTTATGC TAGAGTGGGC GATTACCAAA AGGCATTCCA AGACTTTAAT 
CAAGCTATTG GCCTTGATCC TCAGTTAGGT CTAGCCTACA ATAACCGAGG GGTTATGCGT 
AGAGAGTTCG GCGATCATGC CGGAGCCATT CAAGATCTTA ATCAGGCCCT TCGCTTTGAT 
CCTAAGTTGG CTAAAGCCTA CAATAACCGA GGGGATACCC ACAGAGAGTT AGGCAACCAT 
CGGGAGGCTA TCCAAGATTA TGATCAAGCG GTTCGCCTTA TTCCTGACAA TCCTAATATT 
TATTACTATC GAGGGGTTGT TCGCACTCAG TTAGGAGATT TTCAAGGGGC GATCGAAGAT 
TATCATCAAG CGGTTACTAT TGATCCTAAA CTGTTTATTT TGGATACAAG ACCTCAACCG 
AGATAA
 
Protein sequence
MIKPFRPLIS LLTLVPILSF GIEPVKAQSP RSNPQPLLAQ NSQNSVEVLF NQGVAKIKAG 
NFSAAIKDFT EVIRLNPNLP EAYNNRGNAR SKLGDNKGAI EDYNQAINLN PKSEQAYYNR 
GKARSELGDN KGAIEDYNQA LNLNPNSAEA YNNRGISRHE LKDHVGAMQD LNQAIRLNPK 
MAEAYSNRGN VRTTIGDTFG AFKDLNHAIG LDPNSAEAYN NRGVTYARVG DYQKAFQDFN 
QAIGLDPQLG LAYNNRGVMR REFGDHAGAI QDLNQALRFD PKLAKAYNNR GDTHRELGNH 
REAIQDYDQA VRLIPDNPNI YYYRGVVRTQ LGDFQGAIED YHQAVTIDPK LFILDTRPQP 
R