Gene PCC7424_5117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5117 
Symbol 
ID7108016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp5681443 
End bp5684460 
Gene Length3018 bp 
Protein Length1005 aa 
Translation table11 
GC content45% 
IMG OID643483327 
ProductIg domain protein group 1 domain protein 
Protein accessionYP_002380336 
Protein GI218442007 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.0644734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACAA TTTTTACGAC TCAAACTCCG TCCAACCCTG AATGGACTGA CAATGTTGCT 
TACGAATTAG GAATGAAATT CAGCAGCACA GAAACTGGAC AAATTACCGC TATTCGTTAC
TGGAGAGCTA ACAGCGAAAC CGGAACTCAT ACGGGTAAAA TTTGGACAGC AACCGGGGAG
CTTTTGGCCA GTGTTACTTT TAGCAATGAA ACCTCCTCTG GCTGGCAGGA ACAGGTTCTC
AGCACACCCC TCAACATCCA AGCTAACACG ACTTATGTGG TCTCCGTTAA CTGCAATCTT
TATTACGTTT ATGCTTATGA TGAACTCGCT AATCCAATTA CTAACGGAGA ACTTAGCTCA
ATAGCAGATG GGAACAATGG GGTGTTTAAT GGAACTCCAG GTGCTTTTCC GGCCAATTCT
TATCGAAATA CTAACTATTT TCGTGATGTC AATTTTGTTA CGGTTGCTCT GCCGACAATT
ACTAAGGTTG GTGGAGATAA TCAGACGGGT GCAGCAGGAA CTGCTTTATC GACTCCCTTA
GTGGTTGAAG TTAAAGATGG TTCTGGTAAT CTTTTGTCAG GGCAAACGGT GAACTTTGCC
GCCACCACCG GAGGAGGTTC AGTTTCTCCG GCCAGTGCCG TAACCGACGC TAACGGACAG
GCTCAGACAA CCTTAACTTT AGGATTGATC CCTGGTGCGA TCGCAAATGT AACGAATACG
GTAGAAGCTA CGGCGGACGG CATCGGAAGC GTTACTTTTA CCTGCGTTGC TAGTCACTCA
ACCGATAATC TCACTGTTTT GACCACTCAA ACTCCAGTAG ATGGCAATAT AACCGATGGA
GTTTCTTACG AATTAGGCAT GAAATTCCGT AGTGCCAGTG GGGGGCAGAT TATAGGAATT
CGCTATTGGA AAGCACCCAG CGAAACCGGA ACTCATACCG GTAAAATCTG GTCAGCAACA
GGAACTCTTT TAGCGAGCGT TAGTTTTACG AATGAGACGG CCTCTGGTTG GCAATATCAA
GCCTTAGAAA CCCCCTTAAA CATTCAAGCC AATACCATCT ACGTAGTTTC TGTTAACGGA
AATAGTTATT ATGTTGCGAC TAACAATGGA CTGGCTAATT CGATTATTAA TGGGGATCTC
AGTTCGGTAG CAGATAACAA CAATGGGGTA TTTAATTTCA ATGCTAATTC TTTTCCCACC
AGTTCTTGGT TTAACAGTAA CTATTTCACA GACATCGTCT TCGTTGTCGG TAGTCGTTTA
GTGAAAGTCT CTGGAGACAA TCAGAGTGGG GCGACAGGGG CTACTCTGCC TAATCCCCTA
GTGGTGCAAG TCCTCGATGC ACAAAACAAT CCTGTATCAG GGCTAACCGT CAATTTTGCA
ATTACCAGTG GGGGGGGATC ACTTTCAGCC AGTAGCGTAG TAACTCAGAA CGGTCAAGCT
AGCACAAATT TAACTTTGGG AGCAGTCCCC ACCGCACCTG GAGGCGTAGT GGTAATAGCG
ACAGTAGACG GCATAGGTTC TACTTATTTT ACTGCTACGG CAACTATTAG TAATCCGAAT
GCGATTTATT TAGAAAACCT AAACCCTGGC ACAACGGCTT GGAAACTGGT CAACCGAGGT
AGTGATGAGA TCGCCGGCTA TGCTTCAGCC ACCAGTATCA ATAAAGGACA ATCTATTGAT
TTTAAAGTTT CTCTAGGCCA AGCTGGACAA TTTACCATTG ATGTGTACCG CTTAGGTTAC
TATGGAGGCG CAGGAGGTCG GCTGATGGCC AGCAGTGGCT CACTCAACGG CACGACTCAA
GCCCCTGGTG TTATCGATCC CAATACTCGT TTAATTGAAT GTAACTGGAC AACCTCTTAT
ACGTTACAGA CCGGCAATGA CTGGACTAGC GGGCTTTATG TGGCTAAATT AACCGATCAA
GCTAGTGGCA AAATAGCCCA TATCTGGTTT GTGGTTCGGG ATGATAGCAG CACTGGGAAA
GTTTTATTTC AAAGCAGTGT CTCTACTGTA TTAGCTTATA GCACAATGGG CGGATACAGC
TTATACACAA TGAACAGTAT TAATGGGCAG CGAGCTTATA AAGTGTCCTA CGATCGGCCT
TTTTCTCAAG CCACTTATCA AGAATCCTAC GAAGCTGACA CGATGCTGCG ATGGGAGTAC
AACATGGTGC GCTGGCTAGA ATCTCAAGCC TACGATGTGA CTTACGTGAG TAACATGGAT
GTTCACACCA ACCCAAATCT GTTGCTCAAT CATCAAGTAT TTCTATCCGT TGGTCACGAT
GAATACTGGT CGAAGGAAAT GCGAGATAAT GTGGAAGCCG CCCGAAATGC GGGAATTAAT
CTCGCCTTTT TCTCTGCAAA TACCTGTTAT TGGCGAGTGA GATTTGAAGA TTCTACCCTC
AATGCTGGAC AAGTTAGACC GAATCGAGTC ATGGCTTGTT ATAAATCAGA TTGGGATCTA
GATCCTGTGG CTATTCAACA AGGGCCAAGT GCAGCCACCA ATAAATTCCG CAGTTTCCAA
AATCAACGCC CAGAAAATGC CCTTTTAGGG GTGATGTATG GTAGCGATAC CCCTAATATT
TATGGTGGAT TTAATATGAT CATCACCAAT AGTACAGATC CTTATTATGC CAACACGGGG
CTATCGAATG GGGATCAACT CACCTTATTA GTGGGTTATG AATGGGATTT TGTGGTTAAT
AATGGGTCTA GCCCTCCTGG GTTGGTCATT CTCTCTCAAT CAGGCGTTCA ACCTGCTGCT
CTTTTACCGA ACTACGACGA ACCCCCAAAT GAACCCGGCC TACCCCAAAA TCAGAACTTT
AACATTGCTA ATTCGGTGCG TTATACCGCC AGTGCAAAAG TTTTTGCCAG TGGAACGATT
CAATGGGCGT GGGGGCTAGA TAGTGATGAT GTTAGCCCGG CGAGGGAAGA TGTGCGGGTT
AAACAAATAA CCGTCAATAT TCTCGCCGAT ATGGGAGCTA CACCCCAAAG CCCCGATCCC
AACATTATTG TCCCTTAA
 
Protein sequence
MTTIFTTQTP SNPEWTDNVA YELGMKFSST ETGQITAIRY WRANSETGTH TGKIWTATGE 
LLASVTFSNE TSSGWQEQVL STPLNIQANT TYVVSVNCNL YYVYAYDELA NPITNGELSS
IADGNNGVFN GTPGAFPANS YRNTNYFRDV NFVTVALPTI TKVGGDNQTG AAGTALSTPL
VVEVKDGSGN LLSGQTVNFA ATTGGGSVSP ASAVTDANGQ AQTTLTLGLI PGAIANVTNT
VEATADGIGS VTFTCVASHS TDNLTVLTTQ TPVDGNITDG VSYELGMKFR SASGGQIIGI
RYWKAPSETG THTGKIWSAT GTLLASVSFT NETASGWQYQ ALETPLNIQA NTIYVVSVNG
NSYYVATNNG LANSIINGDL SSVADNNNGV FNFNANSFPT SSWFNSNYFT DIVFVVGSRL
VKVSGDNQSG ATGATLPNPL VVQVLDAQNN PVSGLTVNFA ITSGGGSLSA SSVVTQNGQA
STNLTLGAVP TAPGGVVVIA TVDGIGSTYF TATATISNPN AIYLENLNPG TTAWKLVNRG
SDEIAGYASA TSINKGQSID FKVSLGQAGQ FTIDVYRLGY YGGAGGRLMA SSGSLNGTTQ
APGVIDPNTR LIECNWTTSY TLQTGNDWTS GLYVAKLTDQ ASGKIAHIWF VVRDDSSTGK
VLFQSSVSTV LAYSTMGGYS LYTMNSINGQ RAYKVSYDRP FSQATYQESY EADTMLRWEY
NMVRWLESQA YDVTYVSNMD VHTNPNLLLN HQVFLSVGHD EYWSKEMRDN VEAARNAGIN
LAFFSANTCY WRVRFEDSTL NAGQVRPNRV MACYKSDWDL DPVAIQQGPS AATNKFRSFQ
NQRPENALLG VMYGSDTPNI YGGFNMIITN STDPYYANTG LSNGDQLTLL VGYEWDFVVN
NGSSPPGLVI LSQSGVQPAA LLPNYDEPPN EPGLPQNQNF NIANSVRYTA SAKVFASGTI
QWAWGLDSDD VSPAREDVRV KQITVNILAD MGATPQSPDP NIIVP