| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5073 |
|---|
| Symbol | |
|---|
| ID | 7107220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 5635405 |
|---|
| End bp | 5636898 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643483284 |
|---|
| Product | transposase, IS605 OrfB family |
|---|
| Protein accession | YP_002380293 |
|---|
| Protein GI | 218441964 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 0.916287 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCAGA AAAAATCTCT AAAAGCCTCT TTAACAAGGA TTAGTCGGTC AAAAATCAAG
ACCGATAAGC CCGTTTACCA AATGCTCAGG GGAATTGAGA GTAAAATCGA ATTTCATCCT
TTTTTAGAAG ATTGGGGCAA CTCTTATCAA AGCATATTAA GAACAGCTTT AAATGACCGA
AAAAAAGGTT TATCAGAAAC AGAAATAGAA AAAAGTTACC AGAAAAAATA TAATATTCAA
TGGGCATGGG CTGATAGTTT AGCCACAAAT GCTAGTGCTG TGTTTGACCA ATTAACGACA
GCTAAAACTA ATCAAATAGA ACAGATAGAA ACCGATCTAA AAATGGGATT AATTAAATCT
CAAGAAATTT TAGAAAAATT AGAAATTTCC TTGAGCAATC CTAATCGGAA AAATACCCGT
AATTTTACTA AAAAGCTGCT AGGTTTAAAG TCAAAGCTGC GGAGATTACA GAGGAAGAAA
CAACAATTAG AAGAGTTAAA ACAGTTAAAA AGATTACATA TATGTTGGGG GTCAAAGAAG
TTATTCAATG CTCAATATCA TTTAAAAGAG AATGGATACT CATCCCACGA TGAATGGTTT
TATGATTGGA GGAAAAAACG GGGAGGAAAT TTTTATAGTG TAGGAAAAGG GTCAGTTGAT
GGTAATAATC CTGTCACAAA AATTCATCAT AGCTCAGAAG ATATATTTAC AGTTACCATT
ACAGTTCCCC GTTGCTATCA AGATACTTAT GGTCAAAATT TAACCTTGAA ATTTGAAGTC
ACGGGTCAAC GCAAACATGA TTTACTCTAT GCTTTAGAAG CTAATAAACC CGTTACTGTT
CAAATTTTCA GACGGGAACA TAAAGACAAT CAATGGTACA TACATCTATC CACATATATT
CAAGCTGTTC CTTACATATC TTCATTAAAA AATGGCTGTT TGGGAATCGA CTTAAATGCT
AATTCAATTG ACCTTGTTTA CATCAAAAGA GATGGAAACT TACATCAAAT ACAGGGACAG
AAAACAGTAT TTTCTTGGGA GATGCCCACA GGAACGACGG GGCAAGTTGA AGCGGCTTTA
AGGGATATTG TGGCTGAAAT TGTGAGAATA GCCCAAAGTT TTGAATGTCC AGTGGCTTGT
GAAGACTTAG ATTTTAGTAA AAAGAAAGCC AGTTTAAGAC ACCAATCAAA AAAATATAAT
CGGATGCTTA GTGGCTTTGT CTATGATAAA TTTCGTTCTT TTTTAGTAGC TAGAGCCGAA
AAATATGGGA TTGAAGTTAT TTTTAAAAAT TCTTTTGCTA CTAGCGTTAT AGCCATGATT
AAGTATATGC CCAAATATGG GTTAAATTCG GCTTCGGCTG CTGCTATGGT AATCGCTAGA
CGAGCATTAG GGTACTCTGA ACGAATCCCT CGTTCTTATT TATCTTTAAT ATGCCCTGAA
TCACGCCTTG GATGGTTCCG GGCATTCATG GGGTCTATGG GGAAAAATTT GTAA
|
|---|
| Protein sequence | MGQKKSLKAS LTRISRSKIK TDKPVYQMLR GIESKIEFHP FLEDWGNSYQ SILRTALNDR
KKGLSETEIE KSYQKKYNIQ WAWADSLATN ASAVFDQLTT AKTNQIEQIE TDLKMGLIKS
QEILEKLEIS LSNPNRKNTR NFTKKLLGLK SKLRRLQRKK QQLEELKQLK RLHICWGSKK
LFNAQYHLKE NGYSSHDEWF YDWRKKRGGN FYSVGKGSVD GNNPVTKIHH SSEDIFTVTI
TVPRCYQDTY GQNLTLKFEV TGQRKHDLLY ALEANKPVTV QIFRREHKDN QWYIHLSTYI
QAVPYISSLK NGCLGIDLNA NSIDLVYIKR DGNLHQIQGQ KTVFSWEMPT GTTGQVEAAL
RDIVAEIVRI AQSFECPVAC EDLDFSKKKA SLRHQSKKYN RMLSGFVYDK FRSFLVARAE
KYGIEVIFKN SFATSVIAMI KYMPKYGLNS ASAAAMVIAR RALGYSERIP RSYLSLICPE
SRLGWFRAFM GSMGKNL
|
|---|
| |