Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_5013 |
Symbol | |
ID | 7107159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 5571912 |
End bp | 5573687 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643483224 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_002380234 |
Protein GI | 218441905 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCACAC AAACCTATTG GAACAAGCAA CTTGAGAATA CATTTAAAAT GAGTCCCCGG TTGTTAACCT GTTCACCCAA TTACTCTAAC CTTTGGAAAG ACCTAAAACA ACCCATTTCA TTTACCCACA CTTCTCAATC ACTCCCTGAG CATTTTACAG CTAAACTTTT AGCCTATTTA TCTCGTTTCT GTTCCGTCTC TTTTTGTTCT GTTTATCATA CTCATTACTT GAGTTTTTTA GGACTATCTG AGTTAGAAAT TAAACAATTA TTTACATTAC CCATTCCCAC TCAAAAAACC GATCTAGATG CGGATTTATC TATTTTGGCT CAATCCAGTT TTGACCAAAT CTCTAACTTA ACGGGAGAAA ATAGTCTGAT TCGCTGTGCT GGATTTATGT TTTCTCAAAG TTCCCAAGCG CAAGACTGTC GTTATAGAGT TAAGCAATTT TTGGGAGCGG TGAACTATGA TCAGCTAGTC TCTTTTTTAA GTTATATTAA ATTTTGTCAT CAGTGGGTAG AAAGCTATCC TGAGCTTTTT AATGAGACCG GATATGATTG TTTATTTTCT CTAACTGAAC TCCTCAAGAA AGAAAAAGCA CTAGCGGATT TTTTCCCTTG CTCTGAGCAA ATTTTTAGAC AACAGTTATC TCATTCTAAT TTAGGTTCTC TACTTTCCCA TAGGGATCAA AGCACAACTC TTTCTTTAAC AGATTTAGAA GCCTGGATTA ATAGTCTTCT CGATCAAGTT TTTGTCATCG AATGTGAGAG TCAAAAAATA CTTTTTTGTA ATGAAAGTTT TGCTCAGAGG GTGGGAGTTA AAAAGGCGGC ACAAGTCAAA GGAAAAACCC TTTTTGACTG TTTTAATTTT CCAGAAGCTA AAGCTATAGC TCACCATCAT CAATCTGTCT TGGTTTCCGG TCAACCTCTG CAAATTAAAG AATCTTTTAC CGTCGGAAAA AAATCCTATT ATGTAGATAC CTTAAAAGTT CCTTTAAAAG ATTCTAACGG TGAAATTTAT GGAATCATCA GCCTATCTCG GAATATTACC GATCTGTTTG AATCTCAGCA AATTCTTTTA GAAAAGCAAG GTCAATTAGA AGCGATTAAC CAAGAATTAG AAGCCTTTTC TTATCGAGTT TCTCATGATT TACAAGCTCC TTTACGAGTC CTCGATGGCT TTAGTCAGAT TCTTTTAAAA ACTTATGAAT CTAAACTAGA TGAAAAAGGA CAATATTACC TAAAACGTAT CAGAGCAAAT TGTCAACGGA TGGGGGAACT GATCAGAAGT TTACTTCAGT TATCTCATAT AGGTTCTAGT TCTCTTGACT CTCAATCCGT CAATTTAAGT GCGATCGCTG CTGAAATTTC CTTACAGTTA AAAGCAACCG AACCAGAGCG AAATGTTGAG TTTAGGATTG CCCCTAACTT GACTGTGATG GGAGATTATC AACTGCTAAC GATTGTGTTA ACTAATTTAC TTAATAATGC TTGGAAATAC ACTTCTAATA CTGAGAAAGC ACTGATTGAA TTTGATTATT GTTTCCAAGA GGATGGAACT AAAGCCTATT TTGTCCGAGA TAATGGGGCG GGCTTTGATA TGACCTATAT TAATAAGTTA TTTAGTGCTT TTGAACGTCT TCATAATGAA CAAGAGTTTC CCGGTCATGG CATTGGTTTA GCGACAGTAA AACGAATTAT AGAGCGTCAC AAAGGATCTG TCTGGGCTTG GGGAGAAGTG GAGAAAGGAG CAACGTTTTA CTTTCAATTG CCCTGA
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Protein sequence | MGTQTYWNKQ LENTFKMSPR LLTCSPNYSN LWKDLKQPIS FTHTSQSLPE HFTAKLLAYL SRFCSVSFCS VYHTHYLSFL GLSELEIKQL FTLPIPTQKT DLDADLSILA QSSFDQISNL TGENSLIRCA GFMFSQSSQA QDCRYRVKQF LGAVNYDQLV SFLSYIKFCH QWVESYPELF NETGYDCLFS LTELLKKEKA LADFFPCSEQ IFRQQLSHSN LGSLLSHRDQ STTLSLTDLE AWINSLLDQV FVIECESQKI LFCNESFAQR VGVKKAAQVK GKTLFDCFNF PEAKAIAHHH QSVLVSGQPL QIKESFTVGK KSYYVDTLKV PLKDSNGEIY GIISLSRNIT DLFESQQILL EKQGQLEAIN QELEAFSYRV SHDLQAPLRV LDGFSQILLK TYESKLDEKG QYYLKRIRAN CQRMGELIRS LLQLSHIGSS SLDSQSVNLS AIAAEISLQL KATEPERNVE FRIAPNLTVM GDYQLLTIVL TNLLNNAWKY TSNTEKALIE FDYCFQEDGT KAYFVRDNGA GFDMTYINKL FSAFERLHNE QEFPGHGIGL ATVKRIIERH KGSVWAWGEV EKGATFYFQL P
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