Gene PCC7424_4973 details

Gene Information

• Locus tag: PCC7424_4973
• Symbol: lspA
• ID: 7107039
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 7424
• Kingdom: Bacteria
• Replicon accession: NC_011729
• Strand: +
• Start bp: 5525160
• End bp: 5525642
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 643483184
• Product: lipoprotein signal peptidase
• Protein accession: YP_002380194
• Protein GI: 218441865
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0597] Lipoprotein signal peptidase
• TIGRFAM ID: [TIGR00077] lipoprotein signal peptidase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 58
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATGAAAA AAAATCGCTG GTTTTGGCTA GTTGCTATTA TTGGGTTAGG GTTAGATCAA 
CTGACCAAGT ATATAACGGT ACAAAGTTTT GAGACTATAG GAGATACTTT TGGGTTATGG 
CCTGGGGTAT TTCATTTAAC TTATGTGATT AATACGGGGG CTGCATTTAG TTTTTTTAAA 
GGAGGGGCAG TCTGGTTACG GTGGTTATCT TTAGCCGTCA GTTTGGGGTT AATTTTTTTG 
GGATGGTATG CCCCAAGAAT GAGAATAGTT GAACAATTGG GATATGGGTT TATTTTAGCG 
GGGGCTTTGG GGAATGGGAT AGACCGGTTT TTATTTGGAT ATGTGGTGGA TTTTTTAGAT 
TTTCGGTTAA TTAATTTTCC GGTTTTTAAT TTGGCTGATA CGTTTATTAA TATAGGAATA 
TTTTTTCTCT TACTGGCTAG TTTTCCTCCT AAATCAAGTT CTCAAAAAAA CACATCCCAA 
TAA 

 

Protein sequence

MMKKNRWFWL VAIIGLGLDQ LTKYITVQSF ETIGDTFGLW PGVFHLTYVI NTGAAFSFFK 
GGAVWLRWLS LAVSLGLIFL GWYAPRMRIV EQLGYGFILA GALGNGIDRF LFGYVVDFLD 
FRLINFPVFN LADTFINIGI FFLLLASFPP KSSSQKNTSQ