Gene PCC7424_4969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_4969 
Symbol 
ID7107035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp5521036 
End bp5522013 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content43% 
IMG OID643483180 
Productprotochlorophyllide oxidoreductase 
Protein accessionYP_002380190 
Protein GI218441861 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01289] light-dependent protochlorophyllide reductase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAC AGCCTAAGTC AACGGTCATC ATTACGGGGG CTTCCTCCGG TGTAGGTTTA 
CAAGCCGCCA AAGCTCTCGC TCTTTCCGGT TGGTATGTCA TCATGGCTTG TCGGGATCTC
GAAAAAACAA GACGAGTCGC CAAAGAAGTA GGAATGCCAA GCGGTAGCTA TATGATTATT
CATATTGATT TAGCTTCCTT AGAAAGTGTT CGTCAGTTTG TCAGAGATTT TAGAGCCATC
GGCAGATCCT TAGATGCTTT AGTGTGTAAT GCTGCTATTT ATATGCCTCT ATTAAAAGAA
CCGTTAAGAA GTCCAGAGGG ATATGAATTA ACGGTTGCCA CGAATCATTT GGGGCATTTT
CTGTTATGTA ATTTAATGTT AGAAGACCTG AAAAAATCAT CAGCCTCACC GCCAAAACTG
GTGATTTTAG GGACTGTTAC CCATAACCCA GACGAATTAG GGGGTAAAAT TCCTCCTCGC
CCCGATTTAG GGGATCTCAA AGGGTTTGCG GAAGGATTTA AAGAGCCTTA CACAATGATT
GATGGTAAGA AGTTTGAGCC AGTTAAAGCC TATAAAGATA GTAAGGTTTG TAATATCCTC
ACCATGAGAG AATTACATCG GCGCTATCAT GAGTCAACGG GTATTGTTTT CAATTCTCTA
TATCCCGGAT GTGTGGCGAC GACAGCCCTA TTCAGAAATC ACTATCCTTT ATTTCAAAAA
CTATTTCCCC TGTTCCAAAA GCATATCACG GGGGGATTTG TCTCAGAAGA GTTATCCGGT
CAACGAGTCG CTCAAGTCGT AACGGATCCG GCTTTTGCTC AATCGGGGGT TTACTGGAGT
TGGGGAAACC GACAAAAGAA AAATGGTAAC GCCTTTGTGC AAAAGGTTTC TTCCCAAGCG
AGAGATGATG AAAACGCCGA ACGCTTATGG GAATTAAGCG AACAATTAGT CGGCCTTAAA
ACTCCTGTAA TGGGTTAA
 
Protein sequence
MQQQPKSTVI ITGASSGVGL QAAKALALSG WYVIMACRDL EKTRRVAKEV GMPSGSYMII 
HIDLASLESV RQFVRDFRAI GRSLDALVCN AAIYMPLLKE PLRSPEGYEL TVATNHLGHF
LLCNLMLEDL KKSSASPPKL VILGTVTHNP DELGGKIPPR PDLGDLKGFA EGFKEPYTMI
DGKKFEPVKA YKDSKVCNIL TMRELHRRYH ESTGIVFNSL YPGCVATTAL FRNHYPLFQK
LFPLFQKHIT GGFVSEELSG QRVAQVVTDP AFAQSGVYWS WGNRQKKNGN AFVQKVSSQA
RDDENAERLW ELSEQLVGLK TPVMG