| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_4938 |
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| Symbol | |
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| ID | 7107004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 5479876 |
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| End bp | 5482959 |
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| Gene Length | 3084 bp |
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| Protein Length | 1027 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643483150 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002380160 |
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| Protein GI | 218441831 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.393519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGTGA TTAAATCTCT CCAACCTCTT AGCGAGCTAA TTGCCAATCA TAACAATTGG
TTAATTGATC AAGTTGTCGA AGACATACGA CAAATACATG ATAGTTATGA TCAATTGACT
TTGACCGAAG CCGGAAAAAG GGCTATTCCT AAACTTTCTC TCATTTTAAT CGACGCAATT
GAAAATCATT CTCATCTTCA AAACCCTTCT CCCTATCTTA ATTCTCTTCA GACAGCCATC
TCTACCACTT TTAAAAGTCA AAAATTAGAT CGGCAAAAGG ACACAAATCA TTTAATTTTT
GTCCAAAAGT TAATCAAATT GTGTCATCAA TGTTATTTGA AAATTTTAAA TCTCGAAAAT
TTTTCTCAAG AACAATATCA AGAATTTAGG AGATTTATCA ATCAATTTTT TGAAAATTTA
GAAATTGAAC TTTATCAGCA AAATTGGATT AATCATTTAG CCTTAGAACA AGAAAAAAAA
AGGCAAATTT ATCATCAAAA AATTGATTTA ATTAATGAGG ATATAGAAGA AATAACTGAT
AAAGTTTTAA GTCAATGGAT CGTAGCGTTA CAGATCCAGA CTTCTCTTCA AATCAAGTAT
GGTAATAGCC CCTCAAATAA AAAACGAATC CGGCGTTTAA ATCAATCTAT TACAGAAAAA
GAGCTATCGG GAAAAAGTAT CGGCTATCTA AACAATTTAA CAGATATGAC AGAGCAGAAA
AATGCAGAGG AGGTCACCAC TCATATTAAT CAAGAAATAC AAGCCCTATT TGATGCTTTC
CCTGATATTT TATTTCGGAT CAATGACCAG GGAATAATTT TAGATTATAA GCTTCAAGAG
CAACAATTGC TGTCCACTGC TCCCGAAGAA GTCATTGGAA AATCGATTCA AGAGGTTTTC
CCCGAACCGA TAGGAAATCA ACTTTATGAA GGGATTCAAC AAGTTCTCTT AACCCGGCAA
CCCTTAAGTC TAGAATATTC TCTAAACATT GAAGATAAAA AGCGGTTTTT TGAGGCTCGT
ATCGTTCAAT TAAATCAGAC TGAAATTATC GCCGTTATTC GTGATATTAG CGCTCGCAAG
CACACCGAAC TCGCTTTAAG AGAAAGTGAA GAAAGACTTT CAACCATTAT TTCAACTAAT
CCTAATGGAT TATTGATTTT AGACCGAGAA GGAAAAGTTC TTTTTGTCAA TCCCGCAGCC
GAAATCCTTT TCGGAAGACC CAAAAAAGAT TTAATGGGAC AAATTTTAGG ACTTCCCATT
ATCGTTAATA ATTATAGTGA AATAGAAATC CTTCAACCGA CCGGAAAAAT GGTCATTGCC
CGGATAAGAC AGGTTAAAAT TCTCTGGGAA GAAAAAGAAG CTTTTTTAGC CTCCTTAGTG
GATGTTACTG ATCTTAAAGG AGCGCAAAAA CAATTAAAAA TCCTCAAGCA AGCCACCGAA
CAAAGTCCAG TTTCAGTCAT TATTACCGAT GCCGAAGGCC ACATAGAATA TGTTAATAGG
AAATTTGAAA AACTGACAGG ATACACTCGA CAAGAAGTGA TCGGAAAAAA TCCTCGACTT
CTCAAATCTG GTAAAATTTC TCAAGACCAA TACAAACAGT TATGGCGAAC CCTAACATCA
GGTCAGGAAT GGCATGGGGA ATTTCACAAT CAAAAAAAGA ATGGAGAACT ATTTTGGGAA
TCGGCTTCTA TCTCCCCGAT CAAAAATGAA GAAGGCGTAA TTACTCATTT TATAGCCATT
AAAGAGGACA TTACCCGACG TAAAGCCCAA GACAGAATTC TCGCTTATCA AGCTAATTAT
GATGCCCTTA CCGGCTTACC TAATCGTTTT TTAGCCATAG ACAGACTCAA ACTCGCCATC
TTACAAGCAG AACGCCAAGA ACAACGAGTA GCGGTCATGT TTATCGACTT AGATCGCTTC
AAAAATGTCA ATGATACCCT CGGCCATGAA TACGGAGATT TACTCTTAAA ACAAGTCGCT
GAACGCTTAA AAAAATGTTT GCGAAAAAGC GATACTGTAG CCCGACTTGG AGGCGATGAA
TTTTTAATTA TTATTCCCAA TTTAAAACAA CCCAGTCATT GTAAAGGAAT TGCCAAGAAA
ATTCTCTCTA GTCTAGAAAA ACCCTTTAAT TTATTAGAAG AAGAAGCCTT TATTTCTGCC
AGTATTGGGA TTACCCTTTA TCCGGATGAT GGCGATGATG TTAACGCTTT AATGCGGAAT
GCAGATACAG CCATGTATCT AGGAAAACGA GGAGGGCGCA ACGATTTTAA ATTTTACACC
CTAGGCATGA ATGAGACAAA TCGGACTAGG ATAATCATAG AAAATTTATT GCATCAAGCC
CTTAAAAAAA AGGAAATCTA TCTCGTTTAT CAGCCGATCA TGGAGTTAAA AACTGAAAAA
GTGATTGGGG CAGAAGCCTT ACTTCGCTGG AATAATCCCC AATTAGGTCA AGTGAGTCCA
GACCAATTTA TTCCCATCGC TGAAGAAACC GGATTAATTA ATCAATTAGG CGCGTGGGTA
ATTTCCCAAG CCTGTCAAGA AGTCGTCCAA TGGAAAGCCC AAGGAACTCC GATATCAGTC
GCTGTTAATC TTTCTCCCCG TCAATTTAGA GACTCAAAAT TGCTCAAAAT AATTACCGAT
GCTATTGCGG TTAACGGAAT TACTAACCAT GACTTAGAAT TAGAAATTAC CGAAAAATTA
TTATTAGAAG ATTCTCCCGG TTCCCAAGGA ATTCTCTCTC AACTCCATCA GATGAATTTT
CCCCTCTCTA TTGACGATTT TGGAACGGGT TATTCTGCCC TCTCCTATCT GATTAAATTT
CCGTTTAACC GTTTAAAAAT TGACCGTTCG TTTATTACCG ATATGACTCA CAGTCAAAAA
GCAATGGGAT TAGTCAAAAC GATTATTGCG ATGAGTCACG GGTTAAATTT ACAAGTCATA
GCCGAAGGCG TAGAAACATC CGAACAACTC AACAGTCTTA AATCCCAAGG CTGCGATTAT
GCTCAAGGAT ACTTTTTTAG TCGCCCCTTA ACCGGCGAAG AGTTTCGTTA CTATCTACAA
TTAAATAAGA ATCCACCCTC CTAG
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| Protein sequence | MPVIKSLQPL SELIANHNNW LIDQVVEDIR QIHDSYDQLT LTEAGKRAIP KLSLILIDAI
ENHSHLQNPS PYLNSLQTAI STTFKSQKLD RQKDTNHLIF VQKLIKLCHQ CYLKILNLEN
FSQEQYQEFR RFINQFFENL EIELYQQNWI NHLALEQEKK RQIYHQKIDL INEDIEEITD
KVLSQWIVAL QIQTSLQIKY GNSPSNKKRI RRLNQSITEK ELSGKSIGYL NNLTDMTEQK
NAEEVTTHIN QEIQALFDAF PDILFRINDQ GIILDYKLQE QQLLSTAPEE VIGKSIQEVF
PEPIGNQLYE GIQQVLLTRQ PLSLEYSLNI EDKKRFFEAR IVQLNQTEII AVIRDISARK
HTELALRESE ERLSTIISTN PNGLLILDRE GKVLFVNPAA EILFGRPKKD LMGQILGLPI
IVNNYSEIEI LQPTGKMVIA RIRQVKILWE EKEAFLASLV DVTDLKGAQK QLKILKQATE
QSPVSVIITD AEGHIEYVNR KFEKLTGYTR QEVIGKNPRL LKSGKISQDQ YKQLWRTLTS
GQEWHGEFHN QKKNGELFWE SASISPIKNE EGVITHFIAI KEDITRRKAQ DRILAYQANY
DALTGLPNRF LAIDRLKLAI LQAERQEQRV AVMFIDLDRF KNVNDTLGHE YGDLLLKQVA
ERLKKCLRKS DTVARLGGDE FLIIIPNLKQ PSHCKGIAKK ILSSLEKPFN LLEEEAFISA
SIGITLYPDD GDDVNALMRN ADTAMYLGKR GGRNDFKFYT LGMNETNRTR IIIENLLHQA
LKKKEIYLVY QPIMELKTEK VIGAEALLRW NNPQLGQVSP DQFIPIAEET GLINQLGAWV
ISQACQEVVQ WKAQGTPISV AVNLSPRQFR DSKLLKIITD AIAVNGITNH DLELEITEKL
LLEDSPGSQG ILSQLHQMNF PLSIDDFGTG YSALSYLIKF PFNRLKIDRS FITDMTHSQK
AMGLVKTIIA MSHGLNLQVI AEGVETSEQL NSLKSQGCDY AQGYFFSRPL TGEEFRYYLQ
LNKNPPS
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