| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_4902 |
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| Symbol | |
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| ID | 7110998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 5441645 |
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| End bp | 5443858 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 643483116 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002380127 |
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| Protein GI | 218441798 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAACT TTAAAGAACC AACCATTAAT CAATACTTAA ATGACGGAAA TCTACTCAAA
AAGCACGGAA AACTGACTCA AGCAATTAAT AAGTATGAGA AAGCTCTTCA TCTTAAGCCC
GACTATATTC CAGCTTTATT CCAATTAGGA GAGATTTACG AAAAAACCCA ACAATTCGAC
CAAGCCATTG TTTATTATCA AAAACTCGTT GAGCTACAGC CAGATGAGGC AACGGTACGA
GCTAATCTAG CTAGGGTAAA ACAGAAGTTA GGAGATATTC AAGGAGCAAT TGCCACATAC
ATCAAAGCAC TTGCTTGTCC ACAGCCACCA GCAATGGTTT ATCAAGGATG GGGAGATGTT
CTAGAGAAAA ATGGACAATT AACCCAAGCG ATTAGGGCTT ATAAAGATGC TATAAAATTA
AAACCAGATC AGCTTAATTT ATATCTAATA TTGGCCAAGC TATATTTTCA AAGAATTCCT
AGTAAAGTAT CTGAAATAAT TAACTTACAA AAACCTATTT CAAAAGTCAA AAATAAGTCA
ATTTATTCGC AAATATGGGA AGGTTTAAAT CAACTCGATT TAGAAAGCTT AGATGGAAAA
GATTATTTAT GGCCAAAAAA ATTAGATAAG AAAGAAGTAA TAAGGTACTT TACTCAGACC
TGTAAGTATA AAGTGCTTGA CTTAAATAAT CTGAGTAAGG AAGATGAACA ATATATAGAA
AACGTCGGAT TATCGGTAGA ATACTTAAAT TTGAATAAAG CATATTTAAT TACTAAGAAT
GGAGTAGAGC AAGAGTCAGA AAATTGCCTC TGGGACTGGG ACAAAGCTAA TATTTTCCCG
ACTCAGGTAC ATCCCCGACA AGTCAAACAC TATAAAAAAA CACAATATCA GATATCTATG
ATTAAAGAAG GGTGTATCTA TGCAATTTGT CCCTGGTCGG GAAAAGTTCT TAAATCAAAT
GATTCCTTGG TATCAATAAG TGAAACTTAT CATATTTTTT ATCGTTTTTC AGGTCGTGAA
ATATTTTACT TAATTACTGG AAATTACTGG AATTCTTCAA AACAGATTTT ATATTTTCCT
AAAACAGATT TAATTGTTGA TCTTGATTTA GCCGAAAGAT ATAAAGAAAC AGAATTATAT
ATCGATGATT TAAACAGATT TAAAGGCTAT CTAGTTACTA ATTGGAATAG TATAAAAGCT
TATTTGCTAA ATTTCAATAA AAATCGAGAA ACTGTCGTGC TAATAAACAC TTTGCACTTT
GCTCATCATC TTATGGATGA ATTAGGAGGA CTTGGCAAAC TCAATAATTA TAACTGCCTA
AATCAAGTTG ACAAATTTCT AGTGGCAGCC GAACCTTTTG GAAAACTTAA TGAAATTTTC
CCCGCCATCA AAAAAGAACG AATAAAACGT ATTTTCCCTA GCGAAAAAAA ATCTGTTAAC
AAGATTTTAG CTCAAGAAAT TTTAGAGAAT AATTTTTTTG CAATTCGGGT AGGGGGTTTT
AAATTTGTTA CAGAAGAGTT AGCGAATCAA ATTTATCATA TTTCAGTCAA AAAATGTAAT
TCAGCTTTTT TAGCGGAAGT TGAACAAGCC AAACAAAAGC ACTTTCCCGT TCTATGGATC
ACGATTCGTC TAGGCTTAAG AACTTGGATC TCTCAAGTTG AAGGTATTGC CAATATTATT
GTCAAACTTT GGCAAGATTT TCCGAACCTT GGAGTTATTA TTGATGGATT TTCTTTACCT
TGTGGTTTTG AAAATGATTC ATCTCTCATA AAAATCATTA AAAATGAAAC AGAGACAGTT
AGAAAAATTA AAGCTTTATT ACCCCCAGAA ATAAAAGTTT ATGATACGGT CGGCTGTATG
CTTTATGAGA GCATTGTTTG GTCTTATGCT GTTGATTTAT ATTTAGCTCA TCACGGAACT
CTACAGCATA AAATAGGATG GATTGCTAAT AAGACTGGTG TAGTACACAC AAATTGTCAG
TCATTTAAAA TAAACAACCC AGATATGTCC GATTTTCTTG GTCTATGGGT AAGAGAAAAA
AAAATAAAAC CAATATATAT CTCTGAGGAT TACATTACAG ATGTAGTCAC AAATGTTTCG
AAAAAGGCAG TGAGAAAAGA TTTAAATAAT TATGAGTGTG ACTGGAAAGT TATGTATAAA
GAACTTTTTG AATTAGCCTC GTTAATTAAG AGAGCAGATT TTAACTCTCG TTAG
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| Protein sequence | MQNFKEPTIN QYLNDGNLLK KHGKLTQAIN KYEKALHLKP DYIPALFQLG EIYEKTQQFD
QAIVYYQKLV ELQPDEATVR ANLARVKQKL GDIQGAIATY IKALACPQPP AMVYQGWGDV
LEKNGQLTQA IRAYKDAIKL KPDQLNLYLI LAKLYFQRIP SKVSEIINLQ KPISKVKNKS
IYSQIWEGLN QLDLESLDGK DYLWPKKLDK KEVIRYFTQT CKYKVLDLNN LSKEDEQYIE
NVGLSVEYLN LNKAYLITKN GVEQESENCL WDWDKANIFP TQVHPRQVKH YKKTQYQISM
IKEGCIYAIC PWSGKVLKSN DSLVSISETY HIFYRFSGRE IFYLITGNYW NSSKQILYFP
KTDLIVDLDL AERYKETELY IDDLNRFKGY LVTNWNSIKA YLLNFNKNRE TVVLINTLHF
AHHLMDELGG LGKLNNYNCL NQVDKFLVAA EPFGKLNEIF PAIKKERIKR IFPSEKKSVN
KILAQEILEN NFFAIRVGGF KFVTEELANQ IYHISVKKCN SAFLAEVEQA KQKHFPVLWI
TIRLGLRTWI SQVEGIANII VKLWQDFPNL GVIIDGFSLP CGFENDSSLI KIIKNETETV
RKIKALLPPE IKVYDTVGCM LYESIVWSYA VDLYLAHHGT LQHKIGWIAN KTGVVHTNCQ
SFKINNPDMS DFLGLWVREK KIKPIYISED YITDVVTNVS KKAVRKDLNN YECDWKVMYK
ELFELASLIK RADFNSR
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