| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_4892 |
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| Symbol | |
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| ID | 7110988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 5430462 |
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| End bp | 5432144 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643483106 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_002380117 |
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| Protein GI | 218441788 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTAAAAA AGCGATCGCC ACACCAGAAC AGATCTATCT TTTTTCCCAT TTTGAGAATT
TTAGGAAGTT GGATCATCAT TATTTTAATG ATTTTAGGGT ATGTGTTCAG TCCAACCCCA
GTTTTAGCCC AATTACAACA AACAGCCCCC ATTATCGTTG ATGGTTATCC TATTTTTCAA
GTCAGTCAGT CAGGACAATT TACCGCCGAA CAACGCGCCG ATGAAGCTAA CCGTTTACTG
AGGGAAAGCA TCAGAAACTC CAATGATCCG ATCGAAGTCA GGATAGATAA TAACCGAGAA
TTACCGGTTA TTTTAGTCGA TGGGGCGCAT TTACTCTCAG TAACCTCTAG TGATGTCCCA
AAAGGAAGAA GTATTACCGA ACAAGCGCAA CTTTGGCGAG AGCAACTCCA GCAAGCAATT
CAACAGGCGC AGTATGAACG AACGGTTAGT TATCTGGTGA GAGAGGGGTT TATTTCCTTA
GTGGTTTTAG TGTTGGCTTT TTTCGTGACT AAACAATTAA ATAAAGTTTG GAAGCGTTGG
ATTGATCCGT TTATAGACCG ATCGATAAAT TCTACCTCTT CAGAAACCGG TCAACCTCAT
ACTCAAATTC CCACTCAACC CAAACCTAGA TTAAAATTTG TCTCGGAGAT TCTTTTAACT
GTCTTGAAAG GCATCATTTG GTTGATTGCT ATTTTTTTTG TTACCAGTCG TTTTCCTCAA
ACTCGGCAGA TCACCTATGA TTTTATTAAT ATTCTCAGAG GTACTTTAAT TACAGATGCT
ATTAGTCTGG GAGATAGTCA ATATTCTTTT TTAGATCTTG TTCTTTTAAT TGCGCTATTA
ATTGCCCTCG TTTTCTTGGC GGGAACAGTC GGCAAATTAT TGCGATCGCG GGTTTTAAAT
TTTACCGGGT TGAGTCGTGC GGCTCAAGAT ACGATTGTTT TAATGGCTAA TTATACCCTA
GTGTTTATTG GGGCGATCGT TATTTTGCAA TTGTGGGGAC TTGATATTAG TTCTTTGACA
GTTTTTGCAG GGGTTTTAGG GGTAGGAATT GGGTTAGGAA TACAGGGAAT TGCTAAAGAG
TTTGTCAGTG GATTAGTCTT AATTTTTGAG CGTCCTATTC AAGTGGGAGA TTTTGTAGAA
GTTGGGGAGT TAATGGGAAC AGTAGAACGG ATCAGTGTGC GCTCTACAGA AATTCGGACT
TTAGATCAAA TTTCGGTTAT TTTACCGAAT TCTCGCTTTT TAGAATCAGA AGTTATTAAT
TGGTCTCATG GCACGTCTAT TTCTCGCTTA AAAGTTCCTA TTGGGGTCGC TTATGGGTCG
GATTTAACAT TAGTGAGAAA TGCCTTATTA GATGCAGCTA AAGAACATAA AGAAATTTTA
ACTAATCCTC CCCCTAGAGT TTTTTTTCAG GGGTTTGGAG ACAGTGCCCT TAATTTTCAA
TTATTAATCT GGATCTCTAA ACCTTATAAG CAATTTCAGA TTAAAAGTGA TTTATATTTT
ATTATCGATT CTATGTTTCG TAAGCGAGGA ATAGAAGTTC CTTTTCCTCA ACGAGATTTA
CATCTTCGCT CTGGAAATCT GCCTCTTGAG GTTTCCCCTG AGTTAATTAA TTCTTTGACG
GAGTTATCGA GTCATTTAGC TAGCTGGATC AAACATCAAT CTAATTCAAA AAGTGACAAT
TGA
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| Protein sequence | MLKKRSPHQN RSIFFPILRI LGSWIIIILM ILGYVFSPTP VLAQLQQTAP IIVDGYPIFQ
VSQSGQFTAE QRADEANRLL RESIRNSNDP IEVRIDNNRE LPVILVDGAH LLSVTSSDVP
KGRSITEQAQ LWREQLQQAI QQAQYERTVS YLVREGFISL VVLVLAFFVT KQLNKVWKRW
IDPFIDRSIN STSSETGQPH TQIPTQPKPR LKFVSEILLT VLKGIIWLIA IFFVTSRFPQ
TRQITYDFIN ILRGTLITDA ISLGDSQYSF LDLVLLIALL IALVFLAGTV GKLLRSRVLN
FTGLSRAAQD TIVLMANYTL VFIGAIVILQ LWGLDISSLT VFAGVLGVGI GLGIQGIAKE
FVSGLVLIFE RPIQVGDFVE VGELMGTVER ISVRSTEIRT LDQISVILPN SRFLESEVIN
WSHGTSISRL KVPIGVAYGS DLTLVRNALL DAAKEHKEIL TNPPPRVFFQ GFGDSALNFQ
LLIWISKPYK QFQIKSDLYF IIDSMFRKRG IEVPFPQRDL HLRSGNLPLE VSPELINSLT
ELSSHLASWI KHQSNSKSDN
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